Mercurial > repos > mvdbeek > bam_readtagger

comparison update_mapq.xml @ 46:7b4fe0f65c3d draft

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planemo upload for repository https://github.com/bardin-lab/readtagger/tree/master/galaxy commit ff53a7c7582a4dfda1bfcc0c8832b4edc223bc5e
author mvdbeek
date Mon, 28 Jan 2019 03:25:40 -0500
parents 0bfc9feacc6e
children 21acaf15af89
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45:0bfc9feacc6e 46:7b4fe0f65c3d
1 <tool id="update_mapq" name="Update MAPQ score" version="0.4.15"> 1 <tool id="update_mapq" name="Update MAPQ score" version="0.4.16">
2 <description>of supplementary alignments</description> 2 <description>of supplementary alignments</description>
3 <requirements> 3 <requirements>
4 <requirement type="package" version="0.4.15">readtagger</requirement> 4 <requirement type="package" version="0.4.16">readtagger</requirement>
5 </requirements> 5 </requirements>
6 <version_command>update_mapq --version</version_command> 6 <version_command>update_mapq --version</version_command>
7 <command detect_errors="aggressive"><![CDATA[ 7 <command detect_errors="aggressive"><![CDATA[
8 update_mapq --source_path '$source_path' --remapped_path '$remapped_path' --output_path '$output_path' 8 update_mapq --source_path '$source_path' --remapped_path '$remapped_path' --output_path '$output_path'
9 ]]></command> 9 ]]></command>