Mercurial > repos > mvdbeek > bam_readtagger

comparison bam_readtagger.xml @ 73:559f210b2c23 draft

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"planemo upload for repository https://github.com/bardin-lab/readtagger/tree/master/galaxy commit a1ef57aa402ca6a3cfc75a9652a02372b8b2c013"
author mvdbeek
date Tue, 07 Apr 2020 12:57:06 +0000
parents 156c4b5f3f38
children d7768519c5fc
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72:b9c0b17b4b48 73:559f210b2c23
1 <tool id="bam_readtagger" name="Tag alignment files" version="0.5.23"> 1 <tool id="bam_readtagger" name="Tag alignment files" version="0.5.24">
2 <description>from multiple bam files</description> 2 <description>from multiple bam files</description>
3 <macros> 3 <macros>
4 <import>macros.xml</import> 4 <import>macros.xml</import>
5 </macros> 5 </macros>
6 <requirements> 6 <requirements>
7 <requirement type="package" version="0.5.23">readtagger</requirement> 7 <requirement type="package" version="0.5.24">readtagger</requirement>
8 </requirements> 8 </requirements>
9 <command detect_errors="aggressive"><![CDATA[ 9 <command detect_errors="aggressive"><![CDATA[
10 readtagger -t '$tag_file' -s 10 readtagger -t '$tag_file' -s
11 #for $element in $alignment_series 11 #for $element in $alignment_series
12 '$element.annotate_with':$element.r_tag:$element.m_tag 12 '$element.annotate_with':$element.r_tag:$element.m_tag