Mercurial > repos > mvdbeek > bam_readtagger

comparison plot_coverage.xml @ 48:54aafdb84833 draft

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planemo upload for repository https://github.com/bardin-lab/readtagger/tree/master/galaxy commit 45d0337e2a0d35e9a83d9c87c005c876c45ee054
author mvdbeek
date Wed, 12 Jun 2019 14:23:18 -0400
parents 21acaf15af89
children 534d6b4aebb0
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47:21acaf15af89 48:54aafdb84833
1 <tool id="plot_coverage" name="Plot coverage" version="0.4.17"> 1 <tool id="plot_coverage" name="Plot coverage" version="0.5.0">
2 <description>as area plot between BAM files</description> 2 <description>as area plot between BAM files</description>
3 <requirements> 3 <requirements>
4 <requirement type="package" version="0.4.17">readtagger</requirement> 4 <requirement type="package" version="0.5.0">readtagger</requirement>
5 </requirements> 5 </requirements>
6 <command detect_errors="aggressive"><![CDATA[ 6 <command detect_errors="aggressive"><![CDATA[
7 #import re 7 #import re
8 #set identifier1 = re.sub('[^\w\-_\.\,]', '_', str( $input1.element_identifier)) 8 #set identifier1 = re.sub('[^\w\-_\.\,]', '_', str( $input1.element_identifier))
9 #set identifier2 = re.sub('[^\w\-_\.\,]', '_', str( $input2.element_identifier)) 9 #set identifier2 = re.sub('[^\w\-_\.\,]', '_', str( $input2.element_identifier))