Mercurial > repos > mvdbeek > bam_readtagger

comparison findcluster.xml @ 24:4f28f8cc8cf4 draft

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planemo upload for repository https://github.com/bardin-lab/readtagger/tree/master/galaxy commit 0d0b3a8319fbe7d48d45ccfcc276496c776f41e3
author mvdbeek
date Tue, 25 Apr 2017 04:06:19 -0400
parents 2981ab2c7217
children e200d6625766
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23:2981ab2c7217 24:4f28f8cc8cf4
1 <tool id="findcluster" name="Find clusters of reads" version="0.3.16"> 1 <tool id="findcluster" name="Find clusters of reads" version="0.3.17">
2 <description>in bam files</description> 2 <description>in bam files</description>
3 <requirements> 3 <requirements>
4 <requirement type="package" version="0.3.16">readtagger</requirement> 4 <requirement type="package" version="0.3.17">readtagger</requirement>
5 </requirements> 5 </requirements>
6 <version_command>findcluster --version</version_command> 6 <version_command>findcluster --version</version_command>
7 <command detect_errors="aggressive"><![CDATA[ 7 <command detect_errors="aggressive"><![CDATA[
8 ln -f -s $input input.bam && 8 ln -f -s $input input.bam &&
9 ln -f -s $input.metadata.bam_index input.bam.bai && 9 ln -f -s $input.metadata.bam_index input.bam.bai &&