Mercurial > repos > mvdbeek > bam_readtagger

comparison update_mapq.xml @ 18:4a14e25b9ea1 draft

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planemo upload for repository https://github.com/bardin-lab/readtagger/tree/master/galaxy commit 51e79d0579f480d98a2c0f6edc3a585455410dfe
author mvdbeek
date Tue, 28 Mar 2017 09:33:11 -0400
parents c685bdcb61ff
children 8d201345f6dc
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17:c685bdcb61ff 18:4a14e25b9ea1
1 <tool id="update_mapq" name="Update MAPQ score" version="0.3.10"> 1 <tool id="update_mapq" name="Update MAPQ score" version="0.3.11">
2 <description>of supplementary alignments</description> 2 <description>of supplementary alignments</description>
3 <requirements> 3 <requirements>
4 <requirement type="package" version="0.3.10">readtagger</requirement> 4 <requirement type="package" version="0.3.11">readtagger</requirement>
5 </requirements> 5 </requirements>
6 <version_command>update_mapq --version</version_command> 6 <version_command>update_mapq --version</version_command>
7 <command detect_errors="aggressive"><![CDATA[ 7 <command detect_errors="aggressive"><![CDATA[
8 update_mapq --source_path '$source_path' --remapped_path '$remapped_path' --output_path '$output_path' 8 update_mapq --source_path '$source_path' --remapped_path '$remapped_path' --output_path '$output_path'
9 ]]></command> 9 ]]></command>