Mercurial > repos > mvdbeek > bam_readtagger

comparison findcluster.xml @ 61:46c9abed6a71 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
"planemo upload for repository https://github.com/bardin-lab/readtagger/tree/master/galaxy commit c876b959858c0de1f28285bb78bb3d9daca40fd0"
author mvdbeek
date Tue, 03 Sep 2019 11:20:48 -0400
parents b8b50498da48
children e0dbdec47f06
comparison
equal deleted inserted replaced
60:b8b50498da48 61:46c9abed6a71
1 <tool id="findcluster" name="Find clusters of reads" version="0.5.12"> 1 <tool id="findcluster" name="Find clusters of reads" version="0.5.13">
2 <description>in bam files</description> 2 <description>in bam files</description>
3 <macros> 3 <macros>
4 <import>macros.xml</import> 4 <import>macros.xml</import>
5 </macros> 5 </macros>
6 <requirements> 6 <requirements>
7 <requirement type="package" version="0.5.12">readtagger</requirement> 7 <requirement type="package" version="0.5.13">readtagger</requirement>
8 </requirements> 8 </requirements>
9 <version_command>findcluster --version</version_command> 9 <version_command>findcluster --version</version_command>
10 <command detect_errors="aggressive"><![CDATA[ 10 <command detect_errors="aggressive"><![CDATA[
11 #import re 11 #import re
12 #set sample_name = re.sub('[^\w\-_\.\,]', '_', str( $input.element_identifier)) 12 #set sample_name = re.sub('[^\w\-_\.\,]', '_', str( $input.element_identifier))