Mercurial > repos > mvdbeek > bam_readtagger

comparison findcluster.xml @ 65:08a10eefc2ca draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
"planemo upload for repository https://github.com/bardin-lab/readtagger/tree/master/galaxy commit 1bc80492c93251d0cbe39d120872869e08d8d435"
author mvdbeek
date Tue, 05 Nov 2019 05:05:32 -0500
parents 31dc40ec7067
children 9ac536101591
comparison
equal deleted inserted replaced
64:31dc40ec7067 65:08a10eefc2ca
1 <tool id="findcluster" name="Find clusters of reads" version="0.5.16"> 1 <tool id="findcluster" name="Find clusters of reads" version="0.5.17">
2 <description>in bam files</description> 2 <description>in bam files</description>
3 <macros> 3 <macros>
4 <import>macros.xml</import> 4 <import>macros.xml</import>
5 </macros> 5 </macros>
6 <requirements> 6 <requirements>
7 <requirement type="package" version="0.5.16">readtagger</requirement> 7 <requirement type="package" version="0.5.17">readtagger</requirement>
8 </requirements> 8 </requirements>
9 <version_command>findcluster --version</version_command> 9 <version_command>findcluster --version</version_command>
10 <command detect_errors="aggressive"><![CDATA[ 10 <command detect_errors="aggressive"><![CDATA[
11 #import re 11 #import re
12 #set sample_name = re.sub('[^\w\-_\.\,]', '_', str( $input.element_identifier)) 12 #set sample_name = re.sub('[^\w\-_\.\,]', '_', str( $input.element_identifier))