annotate gccontent.xml @ 0:878ec9a5f8c0 draft default tip

planemo upload
author matthias
date Tue, 08 Jan 2019 09:43:35 -0500
parents
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
878ec9a5f8c0 planemo upload
matthias
parents:
diff changeset
1 <tool id="gc_content" name="Compute GC content" version="1">
878ec9a5f8c0 planemo upload
matthias
parents:
diff changeset
2 <description>for each sequence in a file</description>
878ec9a5f8c0 planemo upload
matthias
parents:
diff changeset
3 <command>perl $__tool_directory__/gccontent.pl $input output.tsv</command>
878ec9a5f8c0 planemo upload
matthias
parents:
diff changeset
4 <inputs>
878ec9a5f8c0 planemo upload
matthias
parents:
diff changeset
5 <param format="fasta" name="input" type="data" label="Source file"/>
878ec9a5f8c0 planemo upload
matthias
parents:
diff changeset
6 </inputs>
878ec9a5f8c0 planemo upload
matthias
parents:
diff changeset
7 <outputs>
878ec9a5f8c0 planemo upload
matthias
parents:
diff changeset
8 <data format="tabular" name="output" from_work_dir="output.tsv" />
878ec9a5f8c0 planemo upload
matthias
parents:
diff changeset
9 </outputs>
878ec9a5f8c0 planemo upload
matthias
parents:
diff changeset
10 <help>
878ec9a5f8c0 planemo upload
matthias
parents:
diff changeset
11 This tool computes GC content from a FASTA file.
878ec9a5f8c0 planemo upload
matthias
parents:
diff changeset
12 </help>
878ec9a5f8c0 planemo upload
matthias
parents:
diff changeset
13 </tool>