Mercurial > repos > matthias > data_manager_dada2
diff test-data/dada2_taxonomy.loc @ 6:e374299894b0 draft
planemo upload for repository https://github.com/bernt-matthias/mb-galaxy-tools/tree/master/data_managers/data_manager_dada2 commit 11ea529bf7414a4a20e414b50ce7cee5cb5dc4c4
| author | matthias |
|---|---|
| date | Thu, 06 Jun 2019 07:59:19 -0400 |
| parents | 51b90d282704 |
| children |
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--- a/test-data/dada2_taxonomy.loc Fri May 10 11:54:21 2019 -0400 +++ b/test-data/dada2_taxonomy.loc Thu Jun 06 07:59:19 2019 -0400 @@ -7,14 +7,3 @@ # Datasets can be retrieved from https://benjjneb.github.io/dada2/training.html # # taxlevels is a comma separated list of taxonomy levels -silva_132 Silva version 132 /tmp/tmpC8Yc3F/tmpzwAZwA/tmpZp3_e0/database/data_manager_tool-datal4tFOr/dada2/silva_132.taxonomy Kingdom,Phylum,Class,Order,Family,Genus,Species -rdp_16 RDP trainset 16 /tmp/tmpC8Yc3F/tmpzwAZwA/tmpZp3_e0/database/data_manager_tool-datal4tFOr/dada2/rdp_16.taxonomy Kingdom,Phylum,Class,Order,Family,Genus,Species -greengenes_13.84 GreenGenes version 13.84 /tmp/tmpC8Yc3F/tmpzwAZwA/tmpZp3_e0/database/data_manager_tool-datal4tFOr/dada2/greengenes_13.84.taxonomy Kingdom,Phylum,Class,Order,Family,Genus,Species -unite_8.0_fungi UNITE: General Fasta release 8.0 for Fungi /tmp/tmpC8Yc3F/tmpzwAZwA/tmpZp3_e0/database/data_manager_tool-datal4tFOr/dada2/unite_8.0_fungi.taxonomy Kingdom,Phylum,Class,Order,Family,Genus,Species -RefSeq_RDP_2018_05 NCBI RefSeq 16S rRNA database supplemented by RDP (05/2018) /tmp/tmpC8Yc3F/tmpzwAZwA/tmpZp3_e0/database/data_manager_tool-datal4tFOr/dada2/RefSeq_RDP_2018_05.taxonomy Kingdom,Phylum,Class,Order,Family,Genus,Species -gtdb_2018_11 GTDB: Genome Taxonomy Database (Bacteria & Archaea) (11/2018) /tmp/tmpC8Yc3F/tmpzwAZwA/tmpZp3_e0/database/data_manager_tool-datal4tFOr/dada2/gtdb_2018_11.taxonomy Kingdom,Phylum,Class,Order,Family,Genus,Species -hitdb_1 HitDB version 1 (Human InTestinal 16S rRNA) /tmp/tmpC8Yc3F/tmpzwAZwA/tmpZp3_e0/database/data_manager_tool-datal4tFOr/dada2/hitdb_1.taxonomy Kingdom,Phylum,Class,Order,Family,Genus,Species -silva_euk_18S_132 Silva version 132 Eukaryotic 18S /tmp/tmpC8Yc3F/tmpzwAZwA/tmpZp3_e0/database/data_manager_tool-datal4tFOr/dada2/silva_euk_18S_132.taxonomy Kingdom,Phylum,Class,Order,Family,Genus,Species -PR2_4.11.1 Protist Ribosomal Reference database (PR2) 4.11.1 /tmp/tmpC8Yc3F/tmpzwAZwA/tmpZp3_e0/database/data_manager_tool-datal4tFOr/dada2/PR2_4.11.1.taxonomy Kingdom,Supergroup,Division,Class,Order,Family,Genus,Species -rdp_16 RDP trainset 16 /tmp/tmpLsjmNt/tmppH8mTW/tmpqUnkc6/database/data_manager_tool-data1EI7iU/dada2/rdp_16.taxonomy Kingdom,Phylum,Class,Order,Family,Genus,Species -silva_132 Silva version 132 /tmp/tmpLsjmNt/tmppH8mTW/tmpqUnkc6/database/data_manager_tool-data1EI7iU/dada2/silva_132.taxonomy Kingdom,Phylum,Class,Order,Family,Genus,Species