annotate test-data/dada2_taxonomy.loc @ 11:faa2c40569b0 draft

planemo upload for repository https://github.com/bernt-matthias/mb-galaxy-tools/tree/topic/dada2/tools/dada2 commit b59ed2476188176bb5b2973f59899b7d733e7641-dirty
author matthias
date Thu, 29 Aug 2019 09:03:48 -0400
parents 15fe0de4a640
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
9
15fe0de4a640 planemo upload for repository https://github.com/bernt-matthias/mb-galaxy-tools/tree/topic/dada2/tools/dada2 commit a54770771e567c7ad8a9dd75cc4689c3935ef11c
matthias
parents:
diff changeset
1 # This is a sample file distributed with Galaxy that is used to define a
15fe0de4a640 planemo upload for repository https://github.com/bernt-matthias/mb-galaxy-tools/tree/topic/dada2/tools/dada2 commit a54770771e567c7ad8a9dd75cc4689c3935ef11c
matthias
parents:
diff changeset
2 # list of dada2 reference data sets for taxonomy assignment, using three
15fe0de4a640 planemo upload for repository https://github.com/bernt-matthias/mb-galaxy-tools/tree/topic/dada2/tools/dada2 commit a54770771e567c7ad8a9dd75cc4689c3935ef11c
matthias
parents:
diff changeset
3 # tab separated columns:
15fe0de4a640 planemo upload for repository https://github.com/bernt-matthias/mb-galaxy-tools/tree/topic/dada2/tools/dada2 commit a54770771e567c7ad8a9dd75cc4689c3935ef11c
matthias
parents:
diff changeset
4 #
15fe0de4a640 planemo upload for repository https://github.com/bernt-matthias/mb-galaxy-tools/tree/topic/dada2/tools/dada2 commit a54770771e567c7ad8a9dd75cc4689c3935ef11c
matthias
parents:
diff changeset
5 # <unique_build_id> <display_name> <fasta_file_path> <taxlevels>
15fe0de4a640 planemo upload for repository https://github.com/bernt-matthias/mb-galaxy-tools/tree/topic/dada2/tools/dada2 commit a54770771e567c7ad8a9dd75cc4689c3935ef11c
matthias
parents:
diff changeset
6 #
15fe0de4a640 planemo upload for repository https://github.com/bernt-matthias/mb-galaxy-tools/tree/topic/dada2/tools/dada2 commit a54770771e567c7ad8a9dd75cc4689c3935ef11c
matthias
parents:
diff changeset
7 # Datasets can be retrieved from https://benjjneb.github.io/dada2/training.html
15fe0de4a640 planemo upload for repository https://github.com/bernt-matthias/mb-galaxy-tools/tree/topic/dada2/tools/dada2 commit a54770771e567c7ad8a9dd75cc4689c3935ef11c
matthias
parents:
diff changeset
8 #
15fe0de4a640 planemo upload for repository https://github.com/bernt-matthias/mb-galaxy-tools/tree/topic/dada2/tools/dada2 commit a54770771e567c7ad8a9dd75cc4689c3935ef11c
matthias
parents:
diff changeset
9 # taxlevels is a comma separated list of taxonomy levels
15fe0de4a640 planemo upload for repository https://github.com/bernt-matthias/mb-galaxy-tools/tree/topic/dada2/tools/dada2 commit a54770771e567c7ad8a9dd75cc4689c3935ef11c
matthias
parents:
diff changeset
10 test_buildid test_displayname ${__HERE__}/reference.fa Level1,Level2,Level3,Level4,Level5