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comparison examples/sin2psi/pipeline.yaml @ 0:cbbe42422d56 draft

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planemo upload for repository https://github.com/CHESSComputing/ChessAnalysisPipeline/tree/galaxy commit 1401a7e1ae007a6bda260d147f9b879e789b73e0-dirty
author kls286
date Tue, 28 Mar 2023 15:07:30 +0000
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-1:000000000000 0:cbbe42422d56
1 pipeline:
2
3 # Collect map data
4 - reader.YAMLReader:
5 filename: examples/sin2psi/map.yaml
6 schema: MapConfig
7 - processor.MapProcessor
8 - writer.NexusWriter:
9 filename: examples/sin2psi/map.nxs
10 force_overwrite: true
11
12 # Integrate map detector data
13 - reader.MultipleReader:
14 readers:
15 - YAMLReader:
16 filename: examples/sin2psi/map.yaml
17 schema: MapConfig
18 - YAMLReader:
19 filename: examples/sin2psi/integration.yaml
20 schema: IntegrationConfig
21 - processor.IntegrateMapProcessor
22 - writer.NexusWriter:
23 filename: examples/sin2psi/integrated_detector_data.nxs
24 force_overwrite: true
25
26 # Compute sample strain map
27 - reader.MultipleReader:
28 readers:
29 - NexusReader:
30 filename: examples/sin2psi/integrated_detector_data.nxs
31 - YAMLReader:
32 filename: examples/sin2psi/strain_analysis_config.yaml
33 schema: StrainAnalysisConfig
34 - processor.StrainAnalysisProcessor
35 - writer.YAMLWriter:
36 filename: examples/sin2psi/sample_strain_data.yaml
37 force_overwrite: true
38