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comparison spotyping.xml @ 3:ee4b383e7a4b draft

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planemo upload
author jowong
date Mon, 05 Nov 2018 10:13:23 -0500
parents fc1aaa9feace
children d849a2f860e2
comparison
equal deleted inserted replaced
2:fc1aaa9feace 3:ee4b383e7a4b
1 <tool id="spotyping" name="Spoligotype Prediction" version="0.1.1"> 1 <tool id="spotyping" name="Spoligotype Prediction" version="0.1.2">
2 <requirements> 2 <requirements>
3 <requirement type="package" version="2.1">spotyping</requirement> 3 <requirement type="package" version="2.1">spotyping</requirement>
4 </requirements> 4 </requirements>
5 <command> 5 <command detect_errors="aggressive"><![CDATA[
6 SpoTyping.py 6 SpoTyping.py
7 #if str( $data_input.data_selector ) == "paired" 7 #if str( $data_input.data_selector ) == "paired"
8 $data_input.input1.forward $data_input.input1.reverse 8 $data_input.input1.forward $data_input.input1.reverse
9 #end if 9 #end if
10 #if str( $data_input.data_selector ) == "single" 10 #if str( $data_input.data_selector ) == "single"
11 $data_input.input2.element_identifier 11 $data_input.input2.element_identifier
12 #end if 12 #end if
13 ]]>
13 </command> 14 </command>
14 <inputs> 15 <inputs>
15 <conditional name="data_input"> 16 <conditional name="data_input">
16 <param name="data_selector" type="select" label="Single or Paired-end Data" help="Select between paired and single end data to add name to dataset"> 17 <param name="data_selector" type="select" label="Single or Paired-end Data" help="Select between paired and single end data to add name to dataset">
17 <option value="paired">Paired</option> 18 <option value="paired">Paired</option>