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comparison spotyping.xml @ 11:74c96eb05783 draft default tip

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planemo upload
author jowong
date Tue, 13 Nov 2018 03:24:02 -0500
parents 89e001abff91
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10:89e001abff91 11:74c96eb05783
1 <tool id="spotyping" name="Spoligotype Prediction" version="1.0.2"> 1 <tool id="spotyping" name="Spoligotype Prediction" version="1.0.4">
2 <description>fast and accurate in silico Mycobacterium spoligotyping from sequence reads</description> 2 <description>fast and accurate in silico Mycobacterium spoligotyping from sequence reads</description>
3 <requirements> 3 <requirements>
4 <requirement type="package" version="2.1">spotyping</requirement> 4 <requirement type="package" version="2.1">spotyping</requirement>
5 </requirements> 5 </requirements>
6 <command detect_errors="aggressive"><![CDATA[ 6 <command detect_errors="aggressive"><![CDATA[
23 <param name="data_selector" type="select" label="Single or Paired-end Data" help="Select between paired and single end data to add name to dataset"> 23 <param name="data_selector" type="select" label="Single or Paired-end Data" help="Select between paired and single end data to add name to dataset">
24 <option value="paired">Paired</option> 24 <option value="paired">Paired</option>
25 <option value="single">Single</option> 25 <option value="single">Single</option>
26 </param> 26 </param>
27 <when value="paired"> 27 <when value="paired">
28 <param name="input1" format="data" type="data_collection" label="Select a paired collection" help="a paired data"/> 28 <param name="input1" format="data" type="data_collection" collection_type="paired" label="Select a paired collection" help="a paired data"/>
29 </when> 29 </when>
30 <when value="single"> 30 <when value="single">
31 <param name="input2" format="data" type="data_collection" label="input" help="Specify dataset with single reads"/> 31 <param name="input2" format="data" type="data_collection" label="input" help="Specify dataset with single reads"/>
32 </when> 32 </when>
33 </conditional> 33 </conditional>