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comparison spotyping.xml @ 1:6d7d31716caa draft

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planemo upload
author jowong
date Mon, 05 Nov 2018 10:00:16 -0500
parents 376f0194b92a
children fc1aaa9feace
comparison
equal deleted inserted replaced
0:376f0194b92a 1:6d7d31716caa
1 <tool id="spotyping" name="Spoligotype Prediction" version="0.1.0"> 1 <tool id="spotyping" name="Spoligotype Prediction" version="0.1.1">
2 <requirements> 2 <requirements>
3 <requirement type="package" version="2.1">spotyping</requirement> 3 <requirement type="package" version="2.1">spotyping</requirement>
4 </requirements> 4 </requirements>
5 <command> 5 <command>
6 python SpoTyping.py 6 python SpoTyping.py
8 $data_input.input1.forward $data_input.input1.reverse 8 $data_input.input1.forward $data_input.input1.reverse
9 #end if 9 #end if
10 #if str( $data_input.data_selector ) == "single" 10 #if str( $data_input.data_selector ) == "single"
11 $data_input.input2.element_identifier 11 $data_input.input2.element_identifier
12 #end if 12 #end if
13 ></command> 13 </command>
14 <inputs> 14 <inputs>
15 <conditional name="data_input"> 15 <conditional name="data_input">
16 <param name="data_selector" type="select" label="Single or Paired-end Data" help="Select between paired and single end data to add name to dataset"> 16 <param name="data_selector" type="select" label="Single or Paired-end Data" help="Select between paired and single end data to add name to dataset">
17 <option value="paired">Paired</option> 17 <option value="paired">Paired</option>
18 <option value="single">Single</option> 18 <option value="single">Single</option>