Mercurial > repos > jowong > khmer_load_into_counting

comparison khmer_load_into_counting.xml @ 13:efc2329bdf34 draft default tip

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload
author jowong
date Mon, 26 Nov 2018 02:57:38 -0500
parents d300c7c90f63
children
comparison
equal deleted inserted replaced
12:d300c7c90f63 13:efc2329bdf34
1 <tool id="khmer_load_into_counting" name="Load Into Counting" version="1.0.5"> 1 <tool id="khmer_load_into_counting" name="Load Into Counting" version="1.0.6">
2 <description>Creates k-mer countgraph using reads</description> 2 <description>Creates k-mer countgraph using reads</description>
3 <requirements> 3 <requirements>
4 <requirement type="package" version="2.1.2">khmer</requirement> 4 <requirement type="package" version="2.1.2">khmer</requirement>
5 </requirements> 5 </requirements>
6 <command detect_errors="exit_code"><![CDATA[ 6 <command detect_errors="exit_code"><![CDATA[
50 <param name="max_mem" type="integer" value="0" label="Maximum Memory" help="number of tables to use (default: False)" /> 50 <param name="max_mem" type="integer" value="0" label="Maximum Memory" help="number of tables to use (default: False)" />
51 <param name="fp_rate" type="integer" value="0" label="FP rate override" help="Override the automatic FP rate setting for the current script" /> 51 <param name="fp_rate" type="integer" value="0" label="FP rate override" help="Override the automatic FP rate setting for the current script" />
52 </section> 52 </section>
53 </inputs> 53 </inputs>
54 <outputs> 54 <outputs>
55 <data name="hash_output" label="Hash output" format="data" from_work_dir="hash.ct.gz"/> 55 <data name="hash_output" label="Hash output" format="data" type="data_collection" from_work_dir="hash.ct.gz"/>
56 </outputs> 56 </outputs>
57 <help><![CDATA[ 57 <help><![CDATA[
58 || This is the script load-into-counting.py in khmer. 58 || This is the script load-into-counting.py in khmer.
59 || You are running khmer version 2.1.2 59 || You are running khmer version 2.1.2
60 || You are also using screed version 1.0 60 || You are also using screed version 1.0