Mercurial > repos > jowong > khmer_load_into_counting

comparison khmer_load_into_counting.xml @ 3:4dad94eb7411 draft

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planemo upload
author jowong
date Tue, 13 Nov 2018 13:23:29 -0500
parents 57daf7463a42
children 52d772818055
comparison
equal deleted inserted replaced
2:57daf7463a42 3:4dad94eb7411
1 <tool id="khmer_load_into_counting" name="Load Into Counting" version="0.1.2"> 1 <tool id="khmer_load_into_counting" name="Load Into Counting" version="0.1.3">
2 <description>Creates k-mer countgraph using reads</description> 2 <description>Creates k-mer countgraph using reads</description>
3 <requirements> 3 <requirements>
4 <requirement type="package" version="2.1.2">khmer</requirement> 4 <requirement type="package" version="2.1.2">khmer</requirement>
5 </requirements> 5 </requirements>
6 <command detect_errors="exit_code"><![CDATA[ 6 <command detect_errors="exit_code"><![CDATA[
17 #end if 17 #end if
18 #if str( $advanced.num_table ) != "0" 18 #if str( $advanced.num_table ) != "0"
19 -N $advanced.num_table 19 -N $advanced.num_table
20 #end if 20 #end if
21 #if str( $advanced.table_size ) != "0" 21 #if str( $advanced.table_size ) != "0"
22 -x $advanced.size 22 -x $advanced.table_size
23 #end if 23 #end if
24 hash.ct.gz 24 hash.ct.gz
25 #if str( $data_input.data_selector ) == "paired" 25 #if str( $data_input.data_selector ) == "paired"
26 $data_input.input1.forward $data_input.input1.reverse 26 $data_input.input1.forward $data_input.input1.reverse
27 #end if 27 #end if