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Change samtools tool_dependency to iuc package_samtools_0_1_19
author Jim Johnson <jj@umn.edu>
date Thu, 06 Feb 2014 10:45:40 -0600
parents d5580071d910
children
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8:233f2f5169f8 9:09c1e388c20c
1 <tool id="trinityrnaseq" name="Trinity" version="0.0.2"> 1 <tool id="trinityrnaseq" name="Trinity" version="0.0.2">
2 <!-- Written by Jeremy Goecks, now maintained here by bhaas --> 2 <!-- Written by Jeremy Goecks, now maintained here by bhaas -->
3 <description>De novo assembly of RNA-Seq data Using Trinity</description> 3 <description>De novo assembly of RNA-Seq data Using Trinity</description>
4 <requirements> 4 <requirements>
5 <requirement type="package" version="2013_08_14">trinityrnaseq</requirement> 5 <requirement type="package" version="2013_08_14">trinityrnaseq</requirement>
6 <requirement type="package" version="0.1.18">samtools</requirement> 6 <requirement type="package" version="0.1.19">samtools</requirement>
7 <requirement type="package" version="1.0.0">bowtie</requirement> 7 <requirement type="package" version="1.0.0">bowtie</requirement>
8 </requirements> 8 </requirements>
9 <command> 9 <command>
10 Trinity.pl --JM $JM --CPU $CPU 10 Trinity.pl --JM $JM --CPU $CPU
11 11