Mercurial > repos > jjohnson > package_kent
annotate tool_dependencies.xml @ 1:822c8d19cfe3 default tip
Download binary executables if avaiablable, otherwise compile from src
| author | Jim Johnson <jj@umn.edu> |
|---|---|
| date | Wed, 06 Nov 2013 14:17:36 -0600 |
| parents | b05b788e3989 |
| children |
| rev | line source |
|---|---|
| 0 | 1 <?xml version="1.0"?> |
| 2 <tool_dependency> | |
| 3 <package name="kent" version="latest"> | |
| 4 <install version="1.0"> | |
|
1
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
5 <actions_group> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
6 |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
7 <actions os="linux" architecture="x86_64"> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
8 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/blat/blat</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
9 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/blat/gfServer</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
10 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/blat/gfClient</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
11 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/addCols</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
12 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/ameme</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
13 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/autoDtd</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
14 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/autoSql</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
15 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/autoXml</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
16 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/ave</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
17 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/aveCols</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
18 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/axtChain</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
19 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/axtSort</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
20 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/axtSwap</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
21 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/axtToMaf</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
22 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/axtToPsl</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
23 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/bedClip</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
24 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/bedCommonRegions</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
25 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/bedCoverage</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
26 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/bedExtendRanges</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
27 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/bedGeneParts</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
28 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/bedGraphToBigWig</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
29 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/bedIntersect</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
30 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/bedItemOverlapCount</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
31 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/bedPileUps</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
32 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/bedRemoveOverlap</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
33 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/bedRestrictToPositions</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
34 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/bedSort</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
35 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/bedToBigBed</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
36 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/bedToExons</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
37 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/bedToGenePred</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
38 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/bedToPsl</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
39 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/bedWeedOverlapping</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
40 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/bigBedInfo</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
41 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/bigBedNamedItems</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
42 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/bigBedSummary</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
43 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/bigBedToBed</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
44 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/bigWigAverageOverBed</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
45 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/bigWigCorrelate</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
46 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/bigWigInfo</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
47 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/bigWigMerge</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
48 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/bigWigSummary</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
49 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/bigWigToBedGraph</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
50 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/bigWigToWig</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
51 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/blastToPsl</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
52 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/blastXmlToPsl</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
53 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/calc</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
54 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/catDir</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
55 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/catUncomment</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
56 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/chainAntiRepeat</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
57 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/chainFilter</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
58 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/chainMergeSort</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
59 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/chainNet</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
60 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/chainPreNet</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
61 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/chainSort</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
62 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/chainSplit</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
63 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/chainStitchId</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
64 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/chainSwap</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
65 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/chainToAxt</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
66 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/chainToPsl</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
67 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/checkAgpAndFa</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
68 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/checkCoverageGaps</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
69 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/checkHgFindSpec</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
70 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/checkTableCoords</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
71 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/chopFaLines</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
72 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/chromGraphFromBin</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
73 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/chromGraphToBin</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
74 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/colTransform</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
75 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/countChars</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
76 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/crTreeIndexBed</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
77 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/crTreeSearchBed</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
78 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/dbSnoop</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
79 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/dbTrash</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
80 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/estOrient</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
81 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/faCmp</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
82 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/faCount</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
83 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/faFilter</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
84 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/faFilterN</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
85 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/faFrag</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
86 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/faNoise</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
87 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/faOneRecord</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
88 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/faPolyASizes</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
89 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/faRandomize</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
90 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/faRc</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
91 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/faSize</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
92 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/faSomeRecords</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
93 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/faSplit</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
94 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/faToFastq</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
95 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/faToTab</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
96 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/faToTwoBit</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
97 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/faTrans</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
98 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/fastqToFa</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
99 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/featureBits</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
100 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/fetchChromSizes</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
101 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/findMotif</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
102 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/gapToLift</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
103 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/genePredCheck</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
104 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/genePredHisto</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
105 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/genePredSingleCover</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
106 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/genePredToBed</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
107 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/genePredToFakePsl</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
108 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/genePredToGtf</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
109 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/genePredToMafFrames</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
110 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/gff3ToGenePred</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
111 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/gff3ToPsl</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
112 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/gmtime</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
113 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/gtfToGenePred</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
114 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/headRest</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
115 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/hgFindSpec</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
116 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/hgGcPercent</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
117 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/hgLoadBed</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
118 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/hgLoadOut</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
119 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/hgLoadWiggle</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
120 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/hgTrackDb</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
121 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/hgWiggle</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
122 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/hgsql</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
123 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/hgsqldump</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
124 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/htmlCheck</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
125 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/hubCheck</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
126 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/ixIxx</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
127 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/lavToAxt</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
128 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/lavToPsl</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
129 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/ldHgGene</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
130 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/liftOver</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
131 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/liftOverMerge</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
132 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/liftUp</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
133 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/linesToRa</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
134 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/localtime</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
135 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/mafAddIRows</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
136 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/mafAddQRows</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
137 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/mafCoverage</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
138 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/mafFetch</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
139 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/mafFilter</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
140 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/mafFrag</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
141 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/mafFrags</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
142 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/mafGene</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
143 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/mafMeFirst</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
144 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/mafOrder</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
145 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/mafRanges</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
146 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/mafSpeciesList</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
147 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/mafSpeciesSubset</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
148 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/mafSplit</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
149 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/mafSplitPos</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
150 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/mafToAxt</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
151 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/mafToPsl</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
152 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/mafsInRegion</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
153 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/makeTableList</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
154 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/maskOutFa</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
155 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/mktime</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
156 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/mrnaToGene</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
157 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/netChainSubset</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
158 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/netClass</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
159 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/netFilter</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
160 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/netSplit</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
161 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/netSyntenic</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
162 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/netToAxt</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
163 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/netToBed</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
164 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/newProg</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
165 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/nibFrag</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
166 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/nibSize</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
167 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/oligoMatch</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
168 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/overlapSelect</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
169 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/paraFetch</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
170 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/paraSync</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
171 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/positionalTblCheck</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
172 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/pslCDnaFilter</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
173 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/pslCat</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
174 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/pslCheck</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
175 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/pslDropOverlap</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
176 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/pslFilter</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
177 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/pslHisto</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
178 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/pslLiftSubrangeBlat</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
179 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/pslMap</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
180 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/pslMrnaCover</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
181 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/pslPairs</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
182 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/pslPartition</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
183 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/pslPretty</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
184 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/pslRecalcMatch</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
185 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/pslReps</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
186 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/pslSelect</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
187 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/pslSort</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
188 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/pslStats</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
189 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/pslSwap</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
190 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/pslToBed</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
191 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/pslToChain</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
192 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/pslToPslx</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
193 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/pslxToFa</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
194 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/qaToQac</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
195 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/qacAgpLift</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
196 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/qacToQa</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
197 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/qacToWig</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
198 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/raSqlQuery</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
199 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/raToLines</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
200 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/raToTab</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
201 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/randomLines</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
202 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/rmFaDups</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
203 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/rowsToCols</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
204 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/sizeof</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
205 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/spacedToTab</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
206 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/splitFile</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
207 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/splitFileByColumn</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
208 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/sqlToXml</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
209 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/stringify</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
210 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/subChar</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
211 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/subColumn</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
212 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/tailLines</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
213 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/tdbQuery</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
214 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/textHistogram</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
215 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/tickToDate</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
216 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/toLower</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
217 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/toUpper</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
218 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/trfBig</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
219 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/twoBitDup</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
220 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/twoBitInfo</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
221 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/twoBitMask</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
222 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/twoBitToFa</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
223 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/validateFiles</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
224 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/validateManifest</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
225 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/wigCorrelate</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
226 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/wigEncode</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
227 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/wigToBigWig</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
228 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/wordLine</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
229 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/xmlCat</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
230 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/xmlToSql</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
231 <action type="move_directory_files"> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
232 <source_directory>.</source_directory> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
233 <destination_directory>$INSTALL_DIR/bin</destination_directory> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
234 </action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
235 </actions> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
236 |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
237 <actions os="darwin" architecture="x86_64"> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
238 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/addCols</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
239 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/ameme</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
240 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/autoDtd</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
241 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/autoSql</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
242 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/autoXml</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
243 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/ave</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
244 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/aveCols</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
245 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/axtChain</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
246 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/axtSort</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
247 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/axtSwap</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
248 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/axtToMaf</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
249 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/axtToPsl</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
250 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/bedClip</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
251 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/bedCommonRegions</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
252 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/bedCoverage</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
253 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/bedExtendRanges</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
254 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/bedGeneParts</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
255 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/bedGraphToBigWig</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
256 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/bedIntersect</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
257 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/bedItemOverlapCount</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
258 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/bedPileUps</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
259 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/bedRemoveOverlap</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
260 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/bedRestrictToPositions</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
261 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/bedSort</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
262 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/bedToBigBed</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
263 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/bedToExons</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
264 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/bedToGenePred</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
265 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/bedToPsl</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
266 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/bedWeedOverlapping</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
267 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/bigBedInfo</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
268 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/bigBedNamedItems</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
269 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/bigBedSummary</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
270 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/bigBedToBed</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
271 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/bigWigAverageOverBed</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
272 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/bigWigCorrelate</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
273 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/bigWigInfo</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
274 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/bigWigMerge</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
275 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/bigWigSummary</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
276 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/bigWigToBedGraph</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
277 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/bigWigToWig</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
278 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/blastToPsl</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
279 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/blastXmlToPsl</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
280 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/blat</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
281 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/calc</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
282 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/catDir</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
283 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/catUncomment</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
284 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/chainAntiRepeat</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
285 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/chainFilter</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
286 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/chainMergeSort</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
287 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/chainNet</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
288 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/chainPreNet</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
289 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/chainSort</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
290 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/chainSplit</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
291 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/chainStitchId</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
292 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/chainSwap</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
293 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/chainToAxt</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
294 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/chainToPsl</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
295 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/checkAgpAndFa</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
296 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/checkCoverageGaps</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
297 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/checkHgFindSpec</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
298 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/checkTableCoords</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
299 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/chopFaLines</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
300 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/chromGraphFromBin</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
301 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/chromGraphToBin</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
302 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/colTransform</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
303 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/countChars</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
304 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/crTreeIndexBed</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
305 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/crTreeSearchBed</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
306 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/dbSnoop</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
307 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/dbTrash</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
308 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/estOrient</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
309 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/faCmp</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
310 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/faCount</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
311 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/faFilter</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
312 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/faFilterN</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
313 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/faFrag</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
314 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/faNoise</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
315 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/faOneRecord</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
316 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/faPolyASizes</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
317 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/faRandomize</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
318 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/faRc</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
319 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/faSize</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
320 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/faSomeRecords</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
321 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/faSplit</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
322 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/faToFastq</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
323 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/faToTab</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
324 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/faToTwoBit</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
325 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/faTrans</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
326 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/fastqToFa</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
327 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/featureBits</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
328 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/fetchChromSizes</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
329 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/findMotif</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
330 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/gapToLift</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
331 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/genePredCheck</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
332 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/genePredHisto</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
333 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/genePredSingleCover</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
334 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/genePredToBed</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
335 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/genePredToFakePsl</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
336 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/genePredToGtf</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
337 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/genePredToMafFrames</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
338 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/gfClient</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
339 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/gfServer</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
340 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/gff3ToGenePred</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
341 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/gff3ToPsl</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
342 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/gmtime</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
343 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/gtfToGenePred</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
344 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/headRest</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
345 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/hgFindSpec</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
346 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/hgGcPercent</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
347 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/hgLoadBed</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
348 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/hgLoadOut</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
349 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/hgLoadWiggle</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
350 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/hgTrackDb</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
351 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/hgWiggle</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
352 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/hgsql</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
353 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/hgsqldump</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
354 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/htmlCheck</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
355 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/hubCheck</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
356 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/ixIxx</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
357 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/lavToAxt</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
358 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/lavToPsl</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
359 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/ldHgGene</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
360 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/liftOver</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
361 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/liftOverMerge</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
362 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/liftUp</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
363 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/linesToRa</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
364 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/localtime</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
365 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/mafAddIRows</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
366 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/mafAddQRows</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
367 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/mafCoverage</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
368 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/mafFetch</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
369 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/mafFilter</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
370 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/mafFrag</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
371 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/mafFrags</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
372 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/mafGene</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
373 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/mafMeFirst</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
374 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/mafOrder</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
375 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/mafRanges</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
376 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/mafSpeciesList</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
377 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/mafSpeciesSubset</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
378 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/mafSplit</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
379 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/mafSplitPos</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
380 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/mafToAxt</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
381 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/mafToPsl</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
382 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/mafsInRegion</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
383 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/makeTableList</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
384 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/maskOutFa</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
385 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/mktime</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
386 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/mrnaToGene</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
387 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/netChainSubset</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
388 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/netClass</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
389 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/netFilter</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
390 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/netSplit</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
391 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/netSyntenic</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
392 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/netToAxt</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
393 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/netToBed</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
394 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/newProg</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
395 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/nibFrag</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
396 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/nibSize</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
397 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/oligoMatch</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
398 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/overlapSelect</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
399 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/paraFetch</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
400 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/paraSync</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
401 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/positionalTblCheck</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
402 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/pslCDnaFilter</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
403 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/pslCat</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
404 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/pslCheck</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
405 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/pslDropOverlap</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
406 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/pslFilter</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
407 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/pslHisto</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
408 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/pslLiftSubrangeBlat</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
409 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/pslMap</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
410 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/pslMrnaCover</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
411 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/pslPairs</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
412 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/pslPartition</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
413 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/pslPretty</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
414 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/pslRecalcMatch</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
415 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/pslReps</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
416 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/pslSelect</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
417 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/pslSort</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
418 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/pslStats</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
419 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/pslSwap</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
420 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/pslToBed</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
421 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/pslToChain</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
422 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/pslToPslx</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
423 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/pslxToFa</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
424 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/qaToQac</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
425 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/qacAgpLift</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
426 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/qacToQa</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
427 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/qacToWig</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
428 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/raSqlQuery</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
429 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/raToLines</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
430 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/raToTab</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
431 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/randomLines</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
432 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/rmFaDups</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
433 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/rowsToCols</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
434 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/sizeof</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
435 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/spacedToTab</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
436 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/splitFile</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
437 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/splitFileByColumn</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
438 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/sqlToXml</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
439 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/stringify</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
440 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/subChar</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
441 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/subColumn</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
442 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/tailLines</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
443 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/tdbQuery</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
444 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/textHistogram</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
445 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/tickToDate</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
446 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/toLower</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
447 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/toUpper</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
448 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/trfBig</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
449 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/twoBitDup</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
450 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/twoBitInfo</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
451 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/twoBitMask</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
452 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/twoBitToFa</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
453 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/validateFiles</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
454 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/validateManifest</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
455 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/wigCorrelate</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
456 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/wigEncode</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
457 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/wigToBigWig</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
458 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/wordLine</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
459 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/xmlCat</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
460 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/xmlToSql</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
461 <action type="shell_command">chmod ugo+x *</action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
462 <action type="move_directory_files"> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
463 <source_directory>.</source_directory> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
464 <destination_directory>$INSTALL_DIR/bin</destination_directory> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
465 </action> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
466 </actions> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
467 |
| 0 | 468 <actions> |
| 469 <action type="download_by_url" target_filename="kent.zip">http://hgdownload.cse.ucsc.edu/admin/jksrc.zip</action> | |
| 470 <action type="shell_command"> | |
| 471 export MACHTYPE=`uname -m`; | |
| 472 export BINDIR=$INSTALL_DIR/bin; mkdir $INSTALL_DIR/bin; | |
| 473 cd src/lib; make; | |
| 474 cd ../jkOwnLib; make; | |
| 475 cd ../blat; make; | |
| 476 cd ../gfClient; make; | |
| 477 cd ../gfServer; make; | |
| 478 cd ../utils; mv makefile makefile.orig; grep -v -E 'pslLiftSubrangeBlat|raSqlQuery|scaffoldFaToAgp' makefile.orig > makefile; make | |
| 479 </action> | |
|
1
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
480 </actions> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
481 <action type="set_environment"> |
|
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
482 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable> |
| 0 | 483 </action> |
|
1
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
484 </actions_group> |
| 0 | 485 </install> |
| 486 <readme> | |
| 487 Downloads and installs the latest kent tools from UCSC at: http://hgdownload.cse.ucsc.edu/admin/jksrc.zip | |
| 488 ( The website doesn't offer previously released versions.) | |
| 489 | |
|
1
822c8d19cfe3
Download binary executables if avaiablable, otherwise compile from src
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
490 NOTE: A license is required for use in a COMMERCIAL system. |
| 0 | 491 |
| 492 Blat source and executables are freely available for academic, nonprofit and personal use. | |
| 493 Commercial licensing information is available on the Kent Informatics website (http://www.kentinformatics.com/). | |
| 494 | |
| 495 </readme> | |
| 496 </package> | |
| 497 | |
| 498 </tool_dependency> |
