Mercurial > repos > jjohnson > mzsqlite_psm_align

comparison mzsqlite_psm_align.xml @ 3:ce4174c80be5 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/mzsqlite_psm_align commit 3a37749e711a57ed1ca14b7d23a7ce14f630e6fe-dirty
author jjohnson
date Tue, 10 Apr 2018 10:48:42 -0400
parents 46113c737b68
children a96b2754171c
comparison
equal deleted inserted replaced
2:46113c737b68 3:ce4174c80be5
17 --gffutils_file '$gffutilsdb' 17 --gffutils_file '$gffutilsdb'
18 #end if 18 #end if
19 #if $readlignments: 19 #if $readlignments:
20 --reads_bam '$readlignments' 20 --reads_bam '$readlignments'
21 #end if 21 #end if
22 #if 'probed' in $output_formats: 22 #if 'probed' in str($output_formats).split(','):
23 --probed '$probed' 23 --probed '$probed'
24 #end if 24 #end if
25 #if 'prosam' in $output_formats: 25 #if 'prosam' in str($output_formats).split(','):
26 --prosam '$prosam' 26 --prosam '$prosam'
27 #end if 27 #end if
28 #if 'probam' in $output_formats: 28 #if 'probam' in str($output_formats).split(','):
29 --probam '$probam' 29 --probam '$probam'
30 #end if 30 #end if
31 #if $genomicref: 31 #if $genomicref:
32 --genomeReference $genomicref 32 --genomeReference $genomicref
33 #else 33 #else