Mercurial > repos > jjohnson > gatk2
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Use repository dependency for samtools (from main toolshed) draftMon, 18 Feb 2013 11:13:47 -0600, by Jim Johnson
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Add BQSR and plot_pdf_file options to base_recalibrator.xml draftFri, 28 Dec 2012 14:15:14 -0600, by Jim Johnson
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Replace covariate DinucCovariate with ContextCovariate draftFri, 28 Dec 2012 12:34:05 -0600, by Jim Johnson
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Remove thread options from base_recalibrator.xml draftFri, 28 Dec 2012 12:08:47 -0600, by Jim Johnson
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Fix base_recalibrator.xml option: no_standard_covs draftFri, 28 Dec 2012 11:50:20 -0600, by Jim Johnson
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remove thread options from indel_realigner.xml draftFri, 28 Dec 2012 11:21:40 -0600, by Jim Johnson