Mercurial > repos > jjohnson > ensembl_cdna_translate

comparison ensembl_cdna_translate.py @ 2:b7f2f5e3390c draft

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Uploaded
author jjohnson
date Wed, 29 Nov 2017 16:33:02 -0500
parents a8218b11216f
children d59e3ce10e74
comparison
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1:0f70b1b92161 2:b7f2f5e3390c
27 ext = "/info/assembly/homo_sapiens?" 27 ext = "/info/assembly/homo_sapiens?"
28 max_region = 5000000 28 max_region = 5000000
29 29
30 30
31 def ensembl_rest(ext, headers): 31 def ensembl_rest(ext, headers):
32 if True: print >> sys.stderr, "%s" % ext 32 # if True: print >> sys.stderr, "%s" % ext
33 r = requests.get(server+ext, headers=headers) 33 r = requests.get(server+ext, headers=headers)
34 if r.status_code == 429: 34 if r.status_code == 429:
35 print >> sys.stderr, "response headers: %s\n" % r.headers 35 print >> sys.stderr, "response headers: %s\n" % r.headers
36 if 'Retry-After' in r.headers: 36 if 'Retry-After' in r.headers:
37 sleep(r.headers['Retry-After']) 37 sleep(r.headers['Retry-After'])