diff defuse_bamfastq.xml @ 44:225750bf3770 draft

Uploaded
author jjohnson
date Mon, 04 Jan 2016 15:55:00 -0500
parents 547d8db4673e
children
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--- a/defuse_bamfastq.xml	Wed May 06 14:31:57 2015 -0500
+++ b/defuse_bamfastq.xml	Mon Jan 04 15:55:00 2016 -0500
@@ -1,10 +1,12 @@
 <?xml version="1.0"?>
-<tool id="defuse_bamfastq" name="Defuse BamFastq" version="0.6.1">
+<tool id="defuse_bamfastq" name="Defuse BamFastq" version="@DEFUSE_VERSION@.1">
   <description>converts a bam file to fastq files.</description>
-  <requirements>
-    <requirement type="package" version="0.6.1">defuse</requirement>
-  </requirements>
-  <version_command>bamfastq --version</version_command>
+    <macros>
+        <import>macros.xml</import>
+    </macros>
+    <requirements>
+        <expand macro="defuse_requirement" />
+    </requirements>
   <command>bamfastq
     #if $pair == True :
       $pair
@@ -57,4 +59,5 @@
   <help>
     bamfastq converts a bam file input into a pair of fastq files that can be used as input to deFuse.
   </help>
+    <expand macro="citations"/>
 </tool>