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comparison tool_dependencies.xml @ 30:d0f4f4918b78

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Change boost dependendency to iuc versioni in action as well
author Jim Johnson <jj@umn.edu>
date Tue, 03 Sep 2013 07:02:54 -0500
parents 103d61bfa1f3
children 7c0d935bd205
comparison
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29:103d61bfa1f3 30:d0f4f4918b78
19 <install version="1.0"> 19 <install version="1.0">
20 <actions> 20 <actions>
21 <action type="download_by_url">http://sourceforge.net/projects/defuse/files/defuse/0.6/defuse-0.6.1.tar.gz</action> 21 <action type="download_by_url">http://sourceforge.net/projects/defuse/files/defuse/0.6/defuse-0.6.1.tar.gz</action>
22 <!-- populate the environment variables from the dependent repos --> 22 <!-- populate the environment variables from the dependent repos -->
23 <action type="set_environment_for_install"> 23 <action type="set_environment_for_install">
24 <repository changeset_revision="f5b13e56a321" name="package_boost_1_53" owner="bgruening" prior_installation_required="True" toolshed="http://testtoolshed.g2.bx.psu.edu" > 24 <repository changeset_revision="a72f8efe9201" name="package_boost_1_53" owner="iuc" prior_installation_required="True" toolshed="http://testtoolshed.g2.bx.psu.edu" >
25 <package name="boost" version="1.53.0" /> 25 <package name="boost" version="1.53.0" />
26 </repository> 26 </repository>
27 </action> 27 </action>
28 <action type="shell_command">export CPLUS_INCLUDE_PATH=$BOOST_ROOT_DIR:$CPLUS_INCLUDE_PATH &amp;&amp; cd tools &amp;&amp; make</action> 28 <action type="shell_command">export CPLUS_INCLUDE_PATH=$BOOST_ROOT_DIR:$CPLUS_INCLUDE_PATH &amp;&amp; cd tools &amp;&amp; make</action>
29 <!-- modify create_reference_dataset.pl to handle more than just human genomes --> 29 <!-- modify create_reference_dataset.pl to handle more than just human genomes -->