diff data_manager_conf.xml @ 0:da5d5dc2e55c draft default tip

Uploaded
author jjohnson
date Wed, 09 Dec 2015 13:58:01 -0500
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/data_manager_conf.xml	Wed Dec 09 13:58:01 2015 -0500
@@ -0,0 +1,22 @@
+<?xml version="1.0"?>
+<data_managers>
+  <data_manager tool_file="data_manager/data_manager_snpsift_dbnsfp.xml" id="data_manager_snpsift_dbnsfp" >
+    <data_table name="snpsift_dbnsfps">  <!-- Defines a Data Table to be modified. -->
+      <output> <!-- Handle the output of the Data Manager Tool -->
+        <column name="key" /> <!-- columns that are going to be specified by the Data Manager Tool -->
+        <column name="build" /> <!-- columns that are going to be specified by the Data Manager Tool -->
+        <column name="name" />  <!-- columns that are going to be specified by the Data Manager Tool -->
+        <column name="value" output_ref="out_file" >
+          <move type="directory" relativize_symlinks="True">
+            <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">snpSift/v4_1/dbnsfp</target>
+          </move>
+          <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/snpSift/v4_1/dbnsfp/${value}</value_translation>
+          <value_translation type="function">abspath</value_translation>
+        </column>
+        <column name="annnotations" />  <!-- columns that are going to be specified by the Data Manager Tool -->
+      </output>
+    </data_table>
+  </data_manager>
+</data_managers>
+
+