Mercurial > repos > jjohnson > data_manager_snpeff

diff data_manager/data_manager_snpEff_download.xml @ 5:78bcf4ac437c

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Use tool_data_table with key and version columns added to allow for multiple versions in a .loc file
author Jim Johnson <jj@umn.edu>
date Tue, 13 Jan 2015 12:54:20 -0600
parents 6a378d0f4856
children a329eda0cdff
line wrap: on
line diff
--- a/data_manager/data_manager_snpEff_download.xml	Thu Oct 23 05:43:46 2014 -0500
+++ b/data_manager/data_manager_snpEff_download.xml	Tue Jan 13 12:54:20 2015 -0600
@@ -28,15 +28,15 @@
                 <assert_contents>
                     <!-- Check that a genome was added -->
                     <has_text text="GRCh38.76" />
-                    <has_text text="snpeff4_regulationdb" />
-                    <has_text text="snpeff4_annotations" />
+                    <has_text text="snpeffv_regulationdb" />
+                    <has_text text="snpeffv_annotations" />
                 </assert_contents>
             </output>
         </test>
     </tests>
     <help>
 
-This tool downloads a SnpEff database and populates data tables: snpeff4_genomedb, snpeff4_regulationdb, and snpeff4_annotations.
+This tool downloads a SnpEff database and populates data tables: snpeffv_genomedb, snpeffv_regulationdb, and snpeffv_annotations.
 
 To see the list of available SnpEff genomes run the "SnpEff Databases" data manager which records the available genome databases in data table: snpeff4_databases