# HG changeset patch
# User jjohnson
# Date 1573236432 18000
# Node ID 1e4312aca6b5909694efdc79ec662f349aef125d
# Parent  d4e2e8176db82d2bcd7b0c4564c2ff6009fe3ce8
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/eggnog_mapper/data_manager_eggnog_mapper_abspath commit c4fb2c42cd1f2ce8748a2d949238eea70635f11b-dirty

diff -r d4e2e8176db8 -r 1e4312aca6b5 data_manager/data_manager_eggnog.xml
--- a/data_manager/data_manager_eggnog.xml	Thu Nov 07 12:42:32 2019 -0500
+++ b/data_manager/data_manager_eggnog.xml	Fri Nov 08 13:07:12 2019 -0500
@@ -1,4 +1,4 @@
-<tool id="data_manager_eggnog_abspath" name="EggNOG DB Download" version="@VERSION@.0" tool_type="manage_data">
+<tool id="data_manager_eggnog_abspath" name="EggNOG DB Download" version="@VERSION@.1" tool_type="manage_data">
     <description>eggnog data to a specified directory</description>
     <macros>
         <import>eggnog_macros.xml</import>
diff -r d4e2e8176db8 -r 1e4312aca6b5 data_manager/eggnog_macros.xml
--- a/data_manager/eggnog_macros.xml	Thu Nov 07 12:42:32 2019 -0500
+++ b/data_manager/eggnog_macros.xml	Fri Nov 08 13:07:12 2019 -0500
@@ -135,7 +135,7 @@
             <data name="out_file" format="data_manager_json" label="${tool.name}"/>
         </outputs>
     </xml>
-    <token name="@DOWNLOAD_CMD"><![CDATA[
+    <token name="@DOWNLOAD_CMD@"><![CDATA[
 ## tool should set install_path
 #if $test == 'true'
 #import os.path
@@ -157,6 +157,7 @@
 python '${__tool_directory__}/data_manager_eggnog.py' --config_file '$out_file' --install_path '$install_path' --dbs '$dbs'
     ]]></token>
     <xml name="data_manager_test">
+        <!--
         <test>
             <param name="test" value="true"/>
             <param name="diamond_database" value="false"/>
@@ -167,5 +168,6 @@
                 </assert_contents>
             </output>
         </test>
+        -->
     </xml>
 </macros>
diff -r d4e2e8176db8 -r 1e4312aca6b5 test-data/cached_locally/eggnog_mapper_db.loc
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/cached_locally/eggnog_mapper_db.loc	Fri Nov 08 13:07:12 2019 -0500
@@ -0,0 +1,2 @@
+#value	name	path
+4.5	eggNOG_4.5	${__HERE__}
diff -r d4e2e8176db8 -r 1e4312aca6b5 test-data/cached_locally/eggnog_mapper_hmm_dbs.loc
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/cached_locally/eggnog_mapper_hmm_dbs.loc	Fri Nov 08 13:07:12 2019 -0500
@@ -0,0 +1,2 @@
+#key	db_version	value	name	path
+4.5_ENOG411CB2I	4.5	ENOG411CB2I	ENOG411CB2I	${__HERE__}/hmmdb_levels/ENOG411CB2I/ENOG411CB2I