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comparison cuffdiff_wrapper.xml @ 2:de024d31e777

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Correct exp_diff names
author Jim Johnson <jj@umn.edu>
date Mon, 08 Oct 2012 16:00:05 -0500
parents 6a9bc26ab8d9
children 9d25b0fd882b
comparison
equal deleted inserted replaced
1:6a9bc26ab8d9 2:de024d31e777
235 </data> 235 </data>
236 <data format="tabular" name="cds_read_group_tracking" label="${tool.name} on ${on_string}: CDS Read Group tracking"> 236 <data format="tabular" name="cds_read_group_tracking" label="${tool.name} on ${on_string}: CDS Read Group tracking">
237 <filter>output_sel and 'cds_read_group_tracking' in output_sel</filter> 237 <filter>output_sel and 'cds_read_group_tracking' in output_sel</filter>
238 </data> 238 </data>
239 <data format="tabular" name="tss_groups_exp_diff" label="${tool.name} on ${on_string}: TSS groups differential expression testing"> 239 <data format="tabular" name="tss_groups_exp_diff" label="${tool.name} on ${on_string}: TSS groups differential expression testing">
240 <filter>output_sel and 'tss_groups_exp' in output_sel</filter> 240 <filter>output_sel and 'tss_groups_exp_diff' in output_sel</filter>
241 </data> 241 </data>
242 <data format="tabular" name="tss_groups_fpkm_tracking" label="${tool.name} on ${on_string}: TSS groups FPKM tracking"> 242 <data format="tabular" name="tss_groups_fpkm_tracking" label="${tool.name} on ${on_string}: TSS groups FPKM tracking">
243 <filter>output_sel and 'tss_groups_fpkm_tracking' in output_sel</filter> 243 <filter>output_sel and 'tss_groups_fpkm_tracking' in output_sel</filter>
244 </data> 244 </data>
245 <data format="tabular" name="tss_groups_count_tracking" label="${tool.name} on ${on_string}: TSS groups counts"> 245 <data format="tabular" name="tss_groups_count_tracking" label="${tool.name} on ${on_string}: TSS groups counts">
247 </data> 247 </data>
248 <data format="tabular" name="tss_groups_read_group_tracking" label="${tool.name} on ${on_string}: TSS groups Read Group tracking"> 248 <data format="tabular" name="tss_groups_read_group_tracking" label="${tool.name} on ${on_string}: TSS groups Read Group tracking">
249 <filter>output_sel and 'tss_groups_read_group_tracking' in output_sel</filter> 249 <filter>output_sel and 'tss_groups_read_group_tracking' in output_sel</filter>
250 </data> 250 </data>
251 <data format="tabular" name="isoforms_exp_diff" label="${tool.name} on ${on_string}: transcript differential expression testing"> 251 <data format="tabular" name="isoforms_exp_diff" label="${tool.name} on ${on_string}: transcript differential expression testing">
252 <filter>output_sel and 'isoforms_exp' in output_sel</filter> 252 <filter>output_sel and 'isoforms_exp_diff' in output_sel</filter>
253 </data> 253 </data>
254 <data format="tabular" name="isoforms_fpkm_tracking" label="${tool.name} on ${on_string}: transcript FPKM tracking"> 254 <data format="tabular" name="isoforms_fpkm_tracking" label="${tool.name} on ${on_string}: transcript FPKM tracking">
255 <filter>output_sel and 'isoforms_fpkm_tracking' in output_sel</filter> 255 <filter>output_sel and 'isoforms_fpkm_tracking' in output_sel</filter>
256 </data> 256 </data>
257 <data format="tabular" name="isoforms_count_tracking" label="${tool.name} on ${on_string}: transcript counts"> 257 <data format="tabular" name="isoforms_count_tracking" label="${tool.name} on ${on_string}: transcript counts">
259 </data> 259 </data>
260 <data format="tabular" name="isoforms_read_group_tracking" label="${tool.name} on ${on_string}: transcript Read Group tracking"> 260 <data format="tabular" name="isoforms_read_group_tracking" label="${tool.name} on ${on_string}: transcript Read Group tracking">
261 <filter>output_sel and 'isoforms_read_group_tracking' in output_sel</filter> 261 <filter>output_sel and 'isoforms_read_group_tracking' in output_sel</filter>
262 </data> 262 </data>
263 <data format="tabular" name="genes_exp_diff" label="${tool.name} on ${on_string}: gene differential expression testing"> 263 <data format="tabular" name="genes_exp_diff" label="${tool.name} on ${on_string}: gene differential expression testing">
264 <filter>output_sel and 'genes_exp' in output_sel</filter> 264 <filter>output_sel and 'genes_exp_diff' in output_sel</filter>
265 </data> 265 </data>
266 <data format="tabular" name="genes_fpkm_tracking" label="${tool.name} on ${on_string}: gene FPKM tracking"> 266 <data format="tabular" name="genes_fpkm_tracking" label="${tool.name} on ${on_string}: gene FPKM tracking">
267 <filter>output_sel and 'genes_fpkm_tracking' in output_sel</filter> 267 <filter>output_sel and 'genes_fpkm_tracking' in output_sel</filter>
268 </data> 268 </data>
269 <data format="tabular" name="genes_count_tracking" label="${tool.name} on ${on_string}: gene counts"> 269 <data format="tabular" name="genes_count_tracking" label="${tool.name} on ${on_string}: gene counts">