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comparison cd_hit_est.xml @ 1:12447208b8cb

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Add tool_dependencies
author Jim Johnson <jj@umn.edu>
date Thu, 06 Sep 2012 21:48:31 -0500
parents 13900a1ad862
children c99f307f2bdb
comparison
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0:13900a1ad862 1:12447208b8cb
1 <tool id="cd_hit_est" name="CD-HIT-EST" version="1.0"> 1 <tool id="cd_hit_est" name="CD-HIT-EST" version="1.0">
2 <description>Cluster a nucleotide dataset into representative sequences</description> 2 <description>Cluster a nucleotide dataset into representative sequences</description>
3 <requirements> 3 <requirements>
4 <requirement type="package">cd-hit-est</requirement> 4 <requirement type="package" version="4.6.1">cd-hit-est</requirement>
5 </requirements> 5 </requirements>
6 <command> 6 <command>
7 cd-hit-est -i $fasta_in -o rep_seq -c $similarity -n $wordsize $strand 7 cd-hit-est -i $fasta_in -o rep_seq -c $similarity -n $wordsize $strand
8 </command> 8 </command>
9 <inputs> 9 <inputs>