Mercurial > repos > jjohnson > bcftools_gtcheck

comparison bcftools_gtcheck.xml @ 1:3b6743fcdab3 draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 21c66fb27c7e2fd21c7f7607b3b29e77e64fb86d-dirty
author jjohnson
date Sun, 26 Jun 2016 15:34:57 -0400
parents 29cb1ed96854
children
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0:29cb1ed96854 1:3b6743fcdab3
93 <outputs> 93 <outputs>
94 <data name="output_file" format="tabular" /> 94 <data name="output_file" format="tabular" />
95 </outputs> 95 </outputs>
96 <tests> 96 <tests>
97 <test> 97 <test>
98 <param name="input_files" ftype="vcf" value="view.vcf" /> 98 <param name="input_file" ftype="vcf" value="view.vcf" />
99 <output name="output_file"> 99 <output name="output_file">
100 <assert_contents> 100 <assert_contents>
101 <has_text_matching expression="SM\t10328.0+\t80.68\t12\tNA00002\t0"/> 101 <has_text_matching expression="SM\t10328.0+\t80.68\t12\tNA00002\t0"/>
102 <has_text_matching expression="CN\t1174\t14\t75.57\tNA00002\tNA00001"/> 102 <has_text_matching expression="CN\t1174\t14\t75.57\tNA00002\tNA00001"/>
103 </assert_contents> 103 </assert_contents>