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comparison tool_dependencies.xml @ 7:bf047bff79df draft

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Fix tool_dependencies.xml install.
author Jim Johnson <jj@umn.edu>
date Wed, 24 Oct 2012 11:15:10 -0500
parents fb61d175ab99
children 8efa8a337565
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6:fb61d175ab99 7:bf047bff79df
4 <install version="1.0"> 4 <install version="1.0">
5 <actions> 5 <actions>
6 <action type="shell_command">mkdir augustus</action> 6 <action type="shell_command">mkdir augustus</action>
7 <!-- the first command puts us in the dir for the package name: "augustus"--> 7 <!-- the first command puts us in the dir for the package name: "augustus"-->
8 <action type="shell_command">wget --quiet http://bioinf.uni-greifswald.de/augustus/binaries/augustus.2.6.1.tar.gz</action> 8 <action type="shell_command">wget --quiet http://bioinf.uni-greifswald.de/augustus/binaries/augustus.2.6.1.tar.gz</action>
9 <action type="shell_command">tar zxf ../augustus.2.6.1.tar.gz</action> 9 <action type="shell_command">tar zxf augustus.2.6.1.tar.gz</action>
10 <action type="shell_command">make</action> 10 <action type="shell_command">make</action>
11 <action type="move_directory_files"> 11 <action type="move_directory_files">
12 <source_directory>bin</source_directory> 12 <source_directory>bin</source_directory>
13 <destination_directory>$INSTALL_DIR/bin</destination_directory> 13 <destination_directory>$INSTALL_DIR/bin</destination_directory>
14 </action> 14 </action>