Mercurial > repos > jdv > porechop
view porechop_summarize.pl @ 8:852b3fe95c20 draft
planemo upload for repository https://github.com/jvolkening/galaxy-tools/tree/master/tools/porechop commit aa6136c5fa32b987f64bd2b0dc1f72018038b0bb
author | jdv |
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date | Fri, 20 Oct 2017 23:11:21 -0400 |
parents | 64fcb9c72e47 |
children |
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#!/usr/bin/env perl use strict; use warnings; use 5.012; my $flag = 0; my $table; while (my $line = <STDIN>) { print STDERR $line; if ($line =~ /Barcode\s+Reads\s+Bases\s+File/) { $flag = 1; } next if (! $flag); $table .= $line; } $table =~ s/(^\s+|\e\[\d+m)//gms; pos($table) = 0; $table =~ s/[ \t]+/\t/gms; say $table; exit;