# HG changeset patch
# User jdv
# Date 1520898954 14400
# Node ID f2081dc93880cb89b311daa18e81fcbc52c5efd5
# Parent 4b7d1bcf210cbc612e91ac716d3d39131ad0c063
planemo upload for repository https://github.com/jvolkening/galaxy-tools/tree/master/tools/nanopore_qc commit 1dee763b48c54e1c538f75b7f0de2f5a0ed25d4d
diff -r 4b7d1bcf210c -r f2081dc93880 nanopore_qc.xml
--- a/nanopore_qc.xml Mon Mar 12 15:04:45 2018 -0400
+++ b/nanopore_qc.xml Mon Mar 12 19:55:54 2018 -0400
@@ -3,18 +3,18 @@
Quality report for nanopore data
- r-base
- r-ggplot2
- r-plyr
- r-reshape2
- r-readr
- r-yaml
- r-scales
- r-futile.logger
- r-data.table
- r-optparse
- r-mgcv
- perl-yaml-libyaml
+ r-base
+ r-ggplot2
+ r-plyr
+ r-reshape2
+ r-readr
+ r-yaml
+ r-scales
+ r-futile.logger
+ r-data.table
+ r-optparse
+ r-mgcv
+ perl-yaml-libyaml
@@ -71,12 +71,14 @@
= 0)
+ and one for reads with a quality value greater than the cutoff.
]]>
diff -r 4b7d1bcf210c -r f2081dc93880 test-data/output.html.small.q10
--- a/test-data/output.html.small.q10 Mon Mar 12 15:04:45 2018 -0400
+++ b/test-data/output.html.small.q10 Mon Mar 12 19:55:54 2018 -0400
@@ -76,11 +76,11 @@
| Total Reads |
- 9999 |
+ 9990 |
| Mean Length |
- 927.8 |
+ 928.7 |
| Median Length |
diff -r 4b7d1bcf210c -r f2081dc93880 test-data/output.html.small.q6
--- a/test-data/output.html.small.q6 Mon Mar 12 15:04:45 2018 -0400
+++ b/test-data/output.html.small.q6 Mon Mar 12 19:55:54 2018 -0400
@@ -76,11 +76,11 @@
| Total Reads |
- 9999 |
+ 9990 |
| Mean Length |
- 927.8 |
+ 928.7 |
| Median Length |