# HG changeset patch
# User jdv
# Date 1508120990 14400
# Node ID a5198537f8a29cc2e7e130d478635b0d55ca5833
# Parent ed5df116fad3752dc7c1633a0d587904613b62b2
planemo upload for repository https://github.com/jvolkening/galaxy-tools/tree/master/tools/canu commit da020fbee6e2bd91bc4a8d0850dc601db34ac82b-dirty
diff -r ed5df116fad3 -r a5198537f8a2 canu.xml
--- a/canu.xml Sun Oct 15 21:40:46 2017 -0400
+++ b/canu.xml Sun Oct 15 22:29:50 2017 -0400
@@ -31,6 +31,13 @@
minReadLength=$minReadLength
minOverlapLength=$minOverlapLength
corOutCoverage=$corOutCoverage
+ contigFilter="
+ ${contigFilter.minReads}
+ ${contigFilter.minLength}
+ ${contigFilter.singleReadSpan}
+ ${contigFilter.lowCovSpan}
+ ${contigFilter.lowCovDepth}
+ "
minThreads=\${GALAXY_SLOTS:-1}
maxThreads=\${GALAXY_SLOTS:-1}
gnuplotTested=true
@@ -60,6 +67,14 @@
+
+