Mercurial > repos > jdv > albacore

diff out_dir/pipeline.log @ 9:710ccd01ae81 draft default tip

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/jvolkening/galaxy-tools/tree/master/tools/albacore commit 77215a157940a91a5f46b71f85163dc477434668-dirty
author jdv
date Sun, 05 Aug 2018 12:24:31 -0400
parents 3dfde840119e
children
line wrap: on
line diff
--- a/out_dir/pipeline.log	Mon Jun 18 12:20:28 2018 -0400
+++ /dev/null	Thu Jan 01 00:00:00 1970 +0000
@@ -1,23 +0,0 @@
-2018-06-18 10:19:54,951 ONT Albacore Sequencing Pipeline Software (version 2.0.2)
-2018-06-18 10:19:54,951 Debug level is 0
-2018-06-18 10:19:54,959 Selected config file /home/jeremy/.local/lib/python3.5/site-packages/albacore/data_versioned/r95_450bps_linear.cfg to match flowcell FLO-MIN107 and kit SQK-LSK108
-2018-06-18 10:19:54,959 Using config file: layout_raw_basecall_1d.jsn
-2018-06-18 10:19:55,006 No option 'pipeline > min_qscore_1dsq' in the config, so using the default of 0.0
-2018-06-18 10:19:55,008 No option 'pipeline > min_qscore_1dsq' in the config, so using the default of 0.0
-2018-06-18 10:19:57,745 Submitting file "macs_MacBook_local_20170809_FAH11850_MN21227_sequencing_run_AIV_run_1_84332_read_12103_ch_399_strand.fast5".
-2018-06-18 10:19:57,918 Submitting file "macs_MacBook_local_20170809_FAH11850_MN21227_sequencing_run_AIV_run_1_84332_read_12085_ch_399_strand.fast5".
-2018-06-18 10:19:57,984 Finished processing file "macs_MacBook_local_20170809_FAH11850_MN21227_sequencing_run_AIV_run_1_84332_read_12103_ch_399_strand.fast5".
-2018-06-18 10:19:58,068 Submitting file "macs_MacBook_local_20170809_FAH11850_MN21227_sequencing_run_AIV_run_1_84332_read_12081_ch_399_strand.fast5".
-2018-06-18 10:19:58,125 Finished processing file "macs_MacBook_local_20170809_FAH11850_MN21227_sequencing_run_AIV_run_1_84332_read_12085_ch_399_strand.fast5".
-2018-06-18 10:19:58,229 Submitting file "macs_MacBook_local_20170809_FAH11850_MN21227_sequencing_run_AIV_run_1_84332_read_12175_ch_399_strand.fast5".
-2018-06-18 10:19:58,283 Finished processing file "macs_MacBook_local_20170809_FAH11850_MN21227_sequencing_run_AIV_run_1_84332_read_12081_ch_399_strand.fast5".
-2018-06-18 10:19:58,335 Submitting file "macs_MacBook_local_20170809_FAH11850_MN21227_sequencing_run_AIV_run_1_84332_read_12153_ch_399_strand.fast5".
-2018-06-18 10:19:58,391 Finished processing file "macs_MacBook_local_20170809_FAH11850_MN21227_sequencing_run_AIV_run_1_84332_read_12175_ch_399_strand.fast5".
-2018-06-18 10:19:58,423 Submitting file "macs_MacBook_local_20170809_FAH11850_MN21227_sequencing_run_AIV_run_1_84332_read_12068_ch_399_strand.fast5".
-2018-06-18 10:19:58,482 Finished processing file "macs_MacBook_local_20170809_FAH11850_MN21227_sequencing_run_AIV_run_1_84332_read_12153_ch_399_strand.fast5".
-2018-06-18 10:19:58,535 Submitting file "macs_MacBook_local_20170809_FAH11850_MN21227_sequencing_run_AIV_run_1_84332_read_12091_ch_399_strand.fast5".
-2018-06-18 10:19:58,590 Finished processing file "macs_MacBook_local_20170809_FAH11850_MN21227_sequencing_run_AIV_run_1_84332_read_12068_ch_399_strand.fast5".
-2018-06-18 10:19:58,632 Submitting file "macs_MacBook_local_20170809_FAH11850_MN21227_sequencing_run_AIV_run_1_84332_read_12113_ch_399_strand.fast5".
-2018-06-18 10:19:58,689 Finished processing file "macs_MacBook_local_20170809_FAH11850_MN21227_sequencing_run_AIV_run_1_84332_read_12091_ch_399_strand.fast5".
-2018-06-18 10:19:58,797 Finished processing file "macs_MacBook_local_20170809_FAH11850_MN21227_sequencing_run_AIV_run_1_84332_read_12113_ch_399_strand.fast5".
-2018-06-18 10:19:58,798 Done.