Mercurial > repos > iuc > vsearch

diff shuffling.xml @ 5:e8401372796a draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/vsearch commit 78d01e165304e0be6e6fd017b7314465492d7542
author: iuc
date: Thu, 17 Dec 2015 12:51:04 -0500
parents: 24e4f42410e5
children: 50cc0d99b800
--- a/shuffling.xml	Wed Aug 26 13:34:00 2015 -0400
+++ b/shuffling.xml	Thu Dec 17 12:51:04 2015 -0500
@@ -1,4 +1,4 @@
-<tool id="vsearch_shuffling" name="VSearch shuffling" version="@VERSION@.0">
+<tool id="vsearch_shuffling" name="VSearch shuffling" version="@VERSION@.1">
     <description></description>
     <macros>
         <import>vsearch_macros.xml</import>
@@ -10,10 +10,12 @@
 <![CDATA[
     vsearch
         @GENERAL@
-        --output $outfile
-        --seed $seed
-        --shuffle $infile
-        --topn $topn
+        --output "$outfile"
+        --seed "$seed"
+        --shuffle "$infile"
+        #if str( $topn ):
+            --topn "$topn"
+        #end if
 ]]>
     </command>
     <inputs>
@@ -48,10 +50,6 @@
 
 @EXTERNAL_DOCUMENTATION@
 
--------
-
-@REFERENCES@
-
 
 ]]>
     </help>