Mercurial > repos > iuc > vg_deconstruct
comparison test-data/x.gfa @ 0:d9e1149f48d6 draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/vg commit fc3deb5bce07a12b7f9bbd380118a7d2230a1003"
| author | iuc |
|---|---|
| date | Thu, 09 Apr 2020 08:33:31 +0000 |
| parents | |
| children |
comparison
equal
deleted
inserted
replaced
| -1:000000000000 | 0:d9e1149f48d6 |
|---|---|
| 1 H VN:Z:1.0 | |
| 2 S 56 ATTAGCCATGTGACTTTGAACAAGTTAGTTAA | |
| 3 S 35 A | |
| 4 S 110 TCATTGTCAAC | |
| 5 S 60 T | |
| 6 S 30 ACGTTTGACAATCTATCAC | |
| 7 S 6 TTG | |
| 8 S 67 T | |
| 9 S 215 A | |
| 10 S 73 A | |
| 11 S 182 CTGCTCTCTT | |
| 12 S 164 G | |
| 13 S 115 ACATTAGGA | |
| 14 S 153 T | |
| 15 S 112 ACAGTCAACGCTCAATACAAGG | |
| 16 S 185 TTGTCAGATC | |
| 17 S 64 A | |
| 18 S 186 G | |
| 19 S 90 GAGGAAAGCCTCTGACAACTGGT | |
| 20 S 139 GGGCAC | |
| 21 S 4 T | |
| 22 S 13 A | |
| 23 S 86 C | |
| 24 S 168 A | |
| 25 S 207 CAAA | |
| 26 S 104 TCCTTG | |
| 27 S 183 A | |
| 28 S 52 A | |
| 29 S 177 T | |
| 30 S 12 ATAT | |
| 31 S 179 TGTCCAGGAATGAACC | |
| 32 S 75 A | |
| 33 S 23 T | |
| 34 S 111 A | |
| 35 S 41 TGGAGCCA | |
| 36 S 43 G | |
| 37 S 11 T | |
| 38 S 68 GGAGAT | |
| 39 S 171 G | |
| 40 S 69 C | |
| 41 S 82 G | |
| 42 S 85 G | |
| 43 S 130 TTGTGT | |
| 44 S 119 G | |
| 45 S 125 T | |
| 46 S 39 C | |
| 47 S 77 A | |
| 48 S 126 G | |
| 49 S 108 C | |
| 50 S 71 AT | |
| 51 S 66 C | |
| 52 S 103 C | |
| 53 S 156 C | |
| 54 S 59 G | |
| 55 S 172 CTGCTCTTTCCCTCAATTGTTCATTTGTCT | |
| 56 S 208 T | |
| 57 S 2 A | |
| 58 S 10 A | |
| 59 S 27 CTTTGATTTATTTGAAGT | |
| 60 S 26 T | |
| 61 S 211 GG | |
| 62 S 124 TAAGACCCAGAGGGCTCACCCAGAGTCGAG | |
| 63 S 144 T | |
| 64 S 127 CTCAAGGACAGCTCTCC | |
| 65 S 116 A | |
| 66 S 100 T | |
| 67 S 79 TTTGCTGTGAAGATTAAATTAGGTGATGCTTG | |
| 68 S 200 C | |
| 69 S 20 TGCTATGTGTAACTAGTAATGGTAATGGATAT | |
| 70 S 81 T | |
| 71 S 195 A | |
| 72 S 141 T | |
| 73 S 187 A | |
| 74 S 213 A | |
| 75 S 135 T | |
| 76 S 9 AAATTTTCTGGAGTTCTAT | |
| 77 S 189 A | |
| 78 S 138 T | |
| 79 S 109 T | |
| 80 S 161 T | |
| 81 S 107 GGCTCTTCTGGCTT | |
| 82 S 46 T | |
| 83 S 57 TCTCTCTGAACTTCAGTT | |
| 84 S 152 GCTCTCCTTGTCCCTCC | |
| 85 S 170 C | |
| 86 S 88 C | |
| 87 S 129 T | |
| 88 S 209 G | |
| 89 S 120 CTCTGCTCACCG | |
| 90 S 78 G | |
| 91 S 133 CAGAGTGTATACGA | |
| 92 S 72 G | |
| 93 S 24 TT | |
| 94 S 8 G | |
| 95 S 184 C | |
| 96 S 37 A | |
| 97 S 1 CAAATAAG | |
| 98 S 137 TAACTCTGTTC | |
| 99 S 22 C | |
| 100 S 83 A | |
| 101 S 154 C | |
| 102 S 190 C | |
| 103 S 201 T | |
| 104 S 99 C | |
| 105 S 121 C | |
| 106 S 206 C | |
| 107 S 14 T | |
| 108 S 33 AGGGGTAATGTGGGGAA | |
| 109 S 40 T | |
| 110 S 113 A | |
| 111 S 174 T | |
| 112 S 165 A | |
| 113 S 142 GGTGAAAGA | |
| 114 S 5 C | |
| 115 S 55 T | |
| 116 S 114 G | |
| 117 S 123 GATCTTCAAGTTTGAAAATTGCATCTCAAATC | |
| 118 S 32 T | |
| 119 S 136 G | |
| 120 S 117 T | |
| 121 S 45 C | |
| 122 S 145 AACAGAGGAAATGCC | |
| 123 S 197 T | |
| 124 S 196 AGGGC | |
| 125 S 210 CTACCCAGGCCATTTTAAGTTTCCTGT | |
| 126 S 151 A | |
| 127 S 54 G | |
| 128 S 63 C | |
| 129 S 191 TTCTCATCCCTCCT | |
| 130 S 91 G | |
| 131 S 62 ATT | |
| 132 S 205 TACTCCACAT | |
| 133 S 158 GATCTCTTCACT | |
| 134 S 150 T | |
| 135 S 176 C | |
| 136 S 122 T | |
| 137 S 58 C | |
| 138 S 199 T | |
| 139 S 28 A | |
| 140 S 173 C | |
| 141 S 148 GGCTTTTTATCAGAACATGTTTCCAAGCTTAT | |
| 142 S 188 G | |
| 143 S 92 A | |
| 144 S 36 TGGAAAGAATAC | |
| 145 S 98 TA | |
| 146 S 204 C | |
| 147 S 118 TGGCAGTAGCTCAGAGATCT | |
| 148 S 162 C | |
| 149 S 84 AAGCT | |
| 150 S 7 A | |
| 151 S 25 C | |
| 152 S 203 G | |
| 153 S 95 TTACTG | |
| 154 S 76 G | |
| 155 S 34 G | |
| 156 S 50 TCCTCACTTTGCC | |
| 157 S 93 A | |
| 158 S 18 TCCTGG | |
| 159 S 194 G | |
| 160 S 147 T | |
| 161 S 42 T | |
| 162 S 87 AGGGAATAGTGCCTGGCAT | |
| 163 S 132 C | |
| 164 S 140 C | |
| 165 S 157 A | |
| 166 S 167 G | |
| 167 S 169 GAA | |
| 168 S 202 TAA | |
| 169 S 16 G | |
| 170 S 180 G | |
| 171 S 160 GCCT | |
| 172 S 19 T | |
| 173 S 49 A | |
| 174 S 44 ACAAATCTGGGT | |
| 175 S 31 C | |
| 176 S 146 G | |
| 177 S 74 CTACTGACAGCAGA | |
| 178 S 106 A | |
| 179 S 61 A | |
| 180 S 29 G | |
| 181 S 94 G | |
| 182 S 212 ACTAAGGACAAAGGTGCGGGGAGAT | |
| 183 S 102 GAAACATTTGGCTATTGACCTCTTTC | |
| 184 S 128 C | |
| 185 S 159 G | |
| 186 S 70 G | |
| 187 S 21 GTTGGGCTT | |
| 188 S 193 C | |
| 189 S 38 AAGAT | |
| 190 S 163 TTATCTTTACTGTTACC | |
| 191 S 131 T | |
| 192 S 192 T | |
| 193 S 101 TTACTATGAATCCTCACCTTCCTTGACTTCTT | |
| 194 S 105 G | |
| 195 S 17 T | |
| 196 S 53 CA | |
| 197 S 47 CAA | |
| 198 S 175 A | |
| 199 S 166 AATCTTTCC | |
| 200 S 89 A | |
| 201 S 214 G | |
| 202 S 198 C | |
| 203 S 3 G | |
| 204 S 80 TGA | |
| 205 S 96 C | |
| 206 S 51 G | |
| 207 S 178 A | |
| 208 S 149 CCCTTTTCCC | |
| 209 S 155 A | |
| 210 S 181 A | |
| 211 S 143 A | |
| 212 S 48 G | |
| 213 S 15 CCAACTCTCTGG | |
| 214 S 65 TCTCTAATA | |
| 215 S 97 T | |
| 216 S 134 A | |
| 217 P x 1+,3+,5+,6+,8+,9+,11+,12+,14+,15+,17+,18+,20+,21+,23+,24+,26+,27+,29+,30+,32+,33+,35+,36+,38+,40+,41+,43+,44+,46+,47+,49+,50+,52+,53+,55+,56+,57+,60+,61+,62+,64+,65+,67+,68+,70+,71+,73+,74+,76+,78+,79+,81+,83+,84+,86+,87+,89+,90+,92+,94+,95+,97+,98+,100+,101+,102+,103+,104+,106+,107+,109+,110+,112+,114+,115+,117+,118+,120+,122+,123+,124+,126+,127+,129+,130+,132+,133+,135+,136+,137+,139+,141+,142+,144+,145+,147+,148+,149+,151+,152+,154+,155+,157+,158+,159+,160+,162+,163+,165+,166+,168+,169+,171+,172+,174+,176+,177+,179+,181+,182+,184+,185+,187+,188+,190+,191+,193+,195+,196+,198+,199+,201+,202+,204+,205+,206+,207+,209+,210+,211+,212+,214+,215+ 8M,1M,1M,3M,1M,19M,1M,4M,1M,12M,1M,6M,32M,9M,1M,2M,1M,18M,1M,19M,1M,17M,1M,12M,5M,1M,8M,1M,12M,1M,3M,1M,13M,1M,2M,1M,32M,18M,1M,1M,3M,1M,9M,1M,6M,1M,2M,1M,14M,1M,1M,32M,1M,1M,5M,1M,19M,1M,23M,1M,1M,6M,1M,2M,1M,32M,26M,1M,6M,1M,14M,1M,11M,22M,1M,9M,1M,20M,12M,1M,32M,30M,1M,17M,1M,6M,1M,14M,1M,1M,11M,6M,1M,9M,1M,15M,1M,32M,10M,1M,17M,1M,1M,1M,12M,1M,4M,1M,17M,1M,9M,1M,3M,1M,30M,1M,1M,1M,16M,1M,10M,1M,10M,1M,1M,1M,14M,1M,1M,5M,1M,1M,1M,3M,1M,10M,1M,4M,1M,27M,2M,25M,1M,1M | |
| 218 L 56 + 57 + 0M | |
| 219 L 35 + 36 + 0M | |
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