Mercurial > repos > iuc > vcf2maf

annotate tool_data_table_conf.xml.test @ 1:e214b9ce682e draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/vcf2maf commit f2287e6aab30c72ef1334688127711fc9624352e
author iuc
date Tue, 11 Oct 2022 20:30:14 +0000
parents 5cc03d77196a
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5cc03d77196a planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/vcf2maf commit 30046d5e0df4d80ac687edd03cf44b2afaa04550
iuc
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1 <tables>
5cc03d77196a planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/vcf2maf commit 30046d5e0df4d80ac687edd03cf44b2afaa04550
iuc
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2 <!-- Table of versioned vep cache data for testing -->
5cc03d77196a planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/vcf2maf commit 30046d5e0df4d80ac687edd03cf44b2afaa04550
iuc
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3 <table name="vep_versioned_annotation_cache" comment_char="#">
5cc03d77196a planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/vcf2maf commit 30046d5e0df4d80ac687edd03cf44b2afaa04550
iuc
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4 <columns>value, dbkey, version, cachetype, name, species, path</columns>
5cc03d77196a planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/vcf2maf commit 30046d5e0df4d80ac687edd03cf44b2afaa04550
iuc
parents:
diff changeset
5 <file path="${__HERE__}/test-data/vep_versioned_annotation_cache.loc" />
5cc03d77196a planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/vcf2maf commit 30046d5e0df4d80ac687edd03cf44b2afaa04550
iuc
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diff changeset
6 </table>
5cc03d77196a planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/vcf2maf commit 30046d5e0df4d80ac687edd03cf44b2afaa04550
iuc
parents:
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7 <!-- Locations of all sam indexes under genome directory -->
5cc03d77196a planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/vcf2maf commit 30046d5e0df4d80ac687edd03cf44b2afaa04550
iuc
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8 <table name="fasta_indexes" comment_char="#">
5cc03d77196a planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/vcf2maf commit 30046d5e0df4d80ac687edd03cf44b2afaa04550
iuc
parents:
diff changeset
9 <columns>value, dbkey, name, path</columns>
5cc03d77196a planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/vcf2maf commit 30046d5e0df4d80ac687edd03cf44b2afaa04550
iuc
parents:
diff changeset
10 <file path="${__HERE__}/test-data/fasta_indexes.loc" />
5cc03d77196a planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/vcf2maf commit 30046d5e0df4d80ac687edd03cf44b2afaa04550
iuc
parents:
diff changeset
11 </table>
5cc03d77196a planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/vcf2maf commit 30046d5e0df4d80ac687edd03cf44b2afaa04550
iuc
parents:
diff changeset
12 </tables>