# HG changeset patch
# User iuc
# Date 1638656540 0
# Node ID 94979e9269f978df41085b5da68a72be9359a39f
# Parent  485ea638e0cacd3eb55e4f12086ef745aa3f5d1e
"planemo upload for repository https://github.com/galaxyproject/iuc/tree/master/tools/varscan commit 1232893782204bb041dd6ed46711295cb0bfc03f"

diff -r 485ea638e0ca -r 94979e9269f9 varscan.py
--- a/varscan.py	Sat Jan 18 08:17:56 2020 +0000
+++ b/varscan.py	Sat Dec 04 22:22:20 2021 +0000
@@ -358,8 +358,7 @@
                 self.call, self.error
             )
         else:
-            msg_header = '{0} failed.\n'
-            'No further information about this error is available.\n\n'.format(
+            msg_header = '{0} failed.\nNo further information about this error is available.\n\n'.format(
                 self.call
             )
         return msg_header + self.message
@@ -1045,8 +1044,8 @@
                         if mmqs_diff > max_mmqs_diff:
                             record.filter.add('MMQSdiff')
                         if (
-                            1 -
-                            alt_stats.avg_clipped_len
+                            1
+                            - alt_stats.avg_clipped_len
                             / ref_stats.avg_clipped_len
                         ) > max_relative_len_diff:
                             record.filter.add('ReadLenDiff')