# HG changeset patch
# User iuc
# Date 1638656475 0
# Node ID 4c69f367c326b39da5feb88cf6d9a463feabf99f
# Parent  100090cb4bec3003fa46c535150c7a5186c54fdf
"planemo upload for repository https://github.com/galaxyproject/iuc/tree/master/tools/varscan commit 1232893782204bb041dd6ed46711295cb0bfc03f"

diff -r 100090cb4bec -r 4c69f367c326 varscan.py
--- a/varscan.py	Fri Aug 16 15:49:10 2019 -0400
+++ b/varscan.py	Sat Dec 04 22:21:15 2021 +0000
@@ -358,8 +358,7 @@
                 self.call, self.error
             )
         else:
-            msg_header = '{0} failed.\n'
-            'No further information about this error is available.\n\n'.format(
+            msg_header = '{0} failed.\nNo further information about this error is available.\n\n'.format(
                 self.call
             )
         return msg_header + self.message
@@ -1045,8 +1044,8 @@
                         if mmqs_diff > max_mmqs_diff:
                             record.filter.add('MMQSdiff')
                         if (
-                            1 -
-                            alt_stats.avg_clipped_len
+                            1
+                            - alt_stats.avg_clipped_len
                             / ref_stats.avg_clipped_len
                         ) > max_relative_len_diff:
                             record.filter.add('ReadLenDiff')