Mercurial > repos > iuc > unicycler

changeset 5:21af825a11d3 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/unicycler commit fbcae3c133b8f34507da0d931212435f7772999f
author iuc
date Wed, 19 Sep 2018 14:12:51 -0400
parents 608d1d0ba3a8
children d1ac6363b63b
files unicycler.xml
diffstat 1 files changed, 5 insertions(+), 5 deletions(-) [+]
line wrap: on
line diff
--- a/unicycler.xml	Thu Sep 06 10:59:08 2018 -0400
+++ b/unicycler.xml	Wed Sep 19 14:12:51 2018 -0400
@@ -177,7 +177,7 @@
         </section>
     </inputs>
     <outputs>
-        <data name="assembly_graph" format="txt" from_work_dir="assembly.gfa" label="${tool.name} on ${on_string}: Final Assembly Graph" />
+        <data name="assembly_graph" format="tabular" from_work_dir="assembly.gfa" label="${tool.name} on ${on_string}: Final Assembly Graph" />
         <data name="assembly" format="fasta" from_work_dir="assembly.fasta" label="${tool.name} on ${on_string}: Final Assembly"/>
     </outputs>
     <tests>
@@ -213,7 +213,7 @@
             <section name="lr_align">
                 <param name="scores" value="3,-6,-5,-2"/>
             </section>
-            <output name="assembly_graph" ftype="txt">
+            <output name="assembly_graph" ftype="tabular">
                 <assert_contents>
                     <has_text text="TACGGGGAAGGACGTC"/>
                 </assert_contents>
@@ -268,7 +268,7 @@
             <section name="lr_align">
                 <param name="scores" value="3,-6,-5,-2"/>
             </section>
-            <output name="assembly_graph" ftype="txt">
+            <output name="assembly_graph" ftype="tabular">
                 <assert_contents>
                     <has_text text="TACGGGGAAGGACGTC" />
                 </assert_contents>
@@ -315,7 +315,7 @@
             <section name="lr_align">
                 <param name="scores" value="3,-6,-5,-2"/>
             </section>
-            <output name="assembly_graph" ftype="txt">
+            <output name="assembly_graph" ftype="tabular">
                 <assert_contents>
                     <has_text text="TACGGGGAAGGACGTC" />
                 </assert_contents>
@@ -335,7 +335,7 @@
                 <param name="kmers" value="21,23"/>
             </section>
             <param name="long" value="only_long.fasta" ftype="fasta" />
-            <output name="assembly_graph" ftype="txt">
+            <output name="assembly_graph" ftype="tabular">
                 <assert_contents>
                     <has_text text="S" />
                 </assert_contents>