Mercurial > repos > iuc > ucsc_netsyntenic

comparison netsyntenic.xml @ 1:4c97f2468645 draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ucsc_tools/ucsc_netsyntenic commit 303002db06287fb25306020c4391626842f52162
author iuc
date Sun, 22 Sep 2024 07:25:52 +0000
parents e5cc5dc2c848
children
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0:e5cc5dc2c848 1:4c97f2468645
30 </test> 30 </test>
31 </tests> 31 </tests>
32 <help><![CDATA[ 32 <help><![CDATA[
33 **What it does** 33 **What it does**
34 34
35 `netSyntenic`_ is a tool to add synteny info to a net. See details of `net format`. 35 `netSyntenic`_ is a tool to add synteny info to a net. See details of `net format`_.
36
37 For implementation details see netSyntenic's `source code`_.
36 38
37 .. _netSyntenic: http://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/FOOTER.txt 39 .. _netSyntenic: http://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/FOOTER.txt
38 .. _net format: https://genome.ucsc.edu/goldenPath/help/net.html 40 .. _net format: https://genome.ucsc.edu/goldenPath/help/net.html
41 .. _source code: https://github.com/ucscGenomeBrowser/kent/blob/master/src/hg/mouseStuff/netSyntenic/netSyntenic.c
39 ]]> </help> 42 ]]> </help>
40 <citations> 43 <citations>
41 <citation type="doi">10.1093/bib/bbs038</citation> 44 <citation type="doi">10.1093/bib/bbs038</citation>
42 </citations> 45 </citations>
43 </tool> 46 </tool>