Mercurial > repos > iuc > trinity_super_transcripts

comparison super_transcripts.xml @ 8:e0dd448872f2 draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/trinity commit c468d2b9613f88cc5f96f77ab1e0592d3c9ce707"
author iuc
date Sat, 27 Nov 2021 10:04:30 +0000
parents 9d986ee0e1ea
children 1a7b4d2a8916
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7:9d986ee0e1ea 8:e0dd448872f2
1 <tool id="trinity_super_transcripts" name="Generate SuperTranscripts" version="@WRAPPER_VERSION@"> 1 <tool id="trinity_super_transcripts" name="Generate SuperTranscripts" version="@WRAPPER_VERSION@">
2 <description>from a Trinity assembly</description> 2 <description>from a Trinity assembly</description>
3 <expand macro="bio_tools"/>
4 <macros> 3 <macros>
5 <import>macros.xml</import> 4 <import>macros.xml</import>
6 </macros> 5 </macros>
6 <expand macro="bio_tools"/>
7 <expand macro="requirements"/> 7 <expand macro="requirements"/>
8 <command detect_errors="aggressive"><![CDATA[ 8 <command detect_errors="aggressive"><![CDATA[
9 Trinity_gene_splice_modeler.py --incl_malign --trinity_fasta '$assembly' 9 Trinity_gene_splice_modeler.py --incl_malign --trinity_fasta '$assembly'
10 ]]></command> 10 ]]></command>
11 <inputs> 11 <inputs>