Mercurial > repos > iuc > trinity_run_de_analysis

comparison run_de_analysis.xml @ 1:ac47ba06cd57 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/trinity commit 95f3e6a69bf939326c73a98e3306bccae8414ecd
author iuc
date Fri, 18 Nov 2016 06:06:40 -0500
parents 0b06ab8d5f88
children 7e1c70d4e4a4
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0:0b06ab8d5f88 1:ac47ba06cd57
1 <tool id="trinity_run_de_analysis" name="Differential expression analysis" version="@WRAPPER_VERSION@.0"> 1 <tool id="trinity_run_de_analysis" name="Differential expression analysis" version="@WRAPPER_VERSION@.1">
2 <description>using a Trinity assembly</description> 2 <description>using a Trinity assembly</description>
3 <macros> 3 <macros>
4 <import>macros.xml</import> 4 <import>macros.xml</import>
5 </macros> 5 </macros>
6 <expand macro="requirements"> 6 <expand macro="requirements">
157 ConditionC CondC_replicate2 157 ConditionC CondC_replicate2
158 ----------- ---------------- 158 ----------- ----------------
159 ConditionC CondC_replicate3 159 ConditionC CondC_replicate3
160 =========== ================ 160 =========== ================
161 161
162
163 This file can be generated with the 'Describe samples and replicates' tool.
162 It will probably be the same file as used in the tool 'RNASeq samples quality check for transcript quantification'. 164 It will probably be the same file as used in the tool 'RNASeq samples quality check for transcript quantification'.
163 The names in column 2 must match the names given in the tool 'Build expression matrix for a de novo assembly of RNA-Seq data by Trinity'. 165 The names in column 2 must match the names given in the tool 'Build expression matrix for a de novo assembly of RNA-Seq data by Trinity'.
164 166
165 167
166 .. _Trinity: http://trinityrnaseq.github.io 168 .. _Trinity: http://trinityrnaseq.github.io