Mercurial > repos > iuc > trinity_contig_exn50_statistic
diff contig_exn50_statistic.xml @ 5:d7f06143ce5d draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/trinity commit 9dcdb5348f7439d0ce1e44ed23ad226beb4ae6d4
| author | iuc |
|---|---|
| date | Thu, 14 Jun 2018 03:07:00 -0400 |
| parents | c100bfc83d6a |
| children | a3b691a37b2b |
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--- a/contig_exn50_statistic.xml Mon Jan 22 11:21:40 2018 -0500 +++ b/contig_exn50_statistic.xml Thu Jun 14 03:07:00 2018 -0400 @@ -1,4 +1,4 @@ -<tool id="trinity_contig_exn50_statistic" name="Compute contig Ex90N50 statistic and Ex90 transcript count" version="@WRAPPER_VERSION@.0"> +<tool id="trinity_contig_exn50_statistic" name="Compute contig Ex90N50 statistic and Ex90 transcript count" version="@WRAPPER_VERSION@"> <description>from a Trinity assembly</description> <macros> <import>macros.xml</import> @@ -27,7 +27,7 @@ <help> <![CDATA[ Trinity_ assembles transcript sequences from Illumina RNA-Seq data. -This tool computes the N50 statistic limited to the top most highly expressed transcripts that represent x% of the total normalized expression data. This requires that you have first performed transcript abundance estimation with 'Align reads and estimate abundance for a de novo assembly of RNA-Seq data by Trinity' tool and that you have built the expression matrix with 'Build expression matrix for a de novo assembly of RNA-Seq data by Trinity' tool. +This tool computes the N50 statistic limited to the top most highly expressed transcripts that represent x% of the total normalized expression data. This requires that you have first performed transcript abundance estimation with 'Align reads and estimate abundance for a de novo assembly of RNA-Seq data by Trinity' tool and that you have built the expression matrix with 'Build expression matrix for a de novo assembly of RNA-Seq data by Trinity' tool. **Inputs**