Mercurial > repos > iuc > trinity_contig_exn50_statistic

diff contig_exn50_statistic.xml @ 1:c100bfc83d6a draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/trinity commit 7efdf3224552d113a01043ee5bf4517d770df933
author iuc
date Fri, 31 Mar 2017 11:34:40 -0400
parents d18ba611f741
children d7f06143ce5d
line wrap: on
line diff
--- a/contig_exn50_statistic.xml	Thu Mar 23 10:14:35 2017 -0400
+++ b/contig_exn50_statistic.xml	Fri Mar 31 11:34:40 2017 -0400
@@ -3,16 +3,12 @@
     <macros>
         <import>macros.xml</import>
     </macros>
-    <expand macro="requirements">
-    </expand>
-    <expand macro="stdio"/>
-    <command><![CDATA[
-
+    <expand macro="requirements" />
+    <command detect_errors="aggressive"><![CDATA[
     contig_ExN50_statistic.pl
         '$matrix'
         '$transcripts'
         > '$output'
-
     ]]></command>
     <inputs>
         <param format="tabular" name="matrix" type="data" label="Expression matrix" help="Matrix of normalized expression values produced by 'Build expression matrix for a de novo assembly of RNA-Seq data by Trinity' tool"/>