# HG changeset patch
# User iuc
# Date 1556275008 14400
# Node ID a66bc159f8168dc0e787db4f7f2c8eb02389f161
# Parent  f92fdfb0563c69b2dfb9cd61fda5ad275b03463f
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/trinity commit 3e20977cfa8882c231128158827bbc85a770a371

diff -r f92fdfb0563c -r a66bc159f816 analyze_diff_expr.xml
--- a/analyze_diff_expr.xml	Wed Oct 17 12:50:32 2018 -0400
+++ b/analyze_diff_expr.xml	Fri Apr 26 06:36:48 2019 -0400
@@ -1,4 +1,4 @@
-<tool id="trinity_analyze_diff_expr" name="Extract and cluster differentially expressed transcripts" version="@WRAPPER_VERSION@">
+<tool id="trinity_analyze_diff_expr" name="Extract and cluster differentially expressed transcripts" version="@WRAPPER_VERSION@+galaxy1">
     <description>from a Trinity assembly</description>
     <macros>
         <import>macros.xml</import>
@@ -92,7 +92,7 @@
             <data format="tabular" name="results_matrix_log2_sample_cor" from_work_dir="results.matrix.log2.sample_cor.dat"/>
             <data format="pdf" name="results_matrix_log2_sample_cor_matrix" from_work_dir="results.matrix.log2.sample_cor_matrix.pdf"/>
         </collection>
-        <data format="RData" name="rdata" label="${tool.name} on ${on_string}: RData file" from_work_dir="results.matrix.RData"/>
+        <data format="rdata" name="rdata" label="${tool.name} on ${on_string}: RData file" from_work_dir="results.matrix.RData"/>
         <collection name="GOseq_enrichment" type="list" label="${tool.name} on ${on_string}: GOseq enriched and depleted categories">
             <filter>additional_params['GO_enrichment']['examine_GO_enrichment'] == 'yes'</filter>
             <discover_datasets pattern="(?P&lt;name&gt;.+\.subset\.GOseq\.(enriched|depleted))$" ext="tabular" />