# HG changeset patch
# User iuc
# Date 1573721985 0
# Node ID 1c45e53e57000471a083edfcb3afb62513af7ef4
# Parent  4bb99e046a6ad890b0445b273f6d04c845d5760c
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/trinity commit f3d9db3063d2cba26e6fbe82a3eee4e1a6fe0bd5"

diff -r 4bb99e046a6a -r 1c45e53e5700 README.rst
--- a/README.rst	Fri Nov 01 08:04:26 2019 -0400
+++ b/README.rst	Thu Nov 14 08:59:45 2019 +0000
@@ -9,7 +9,14 @@
 By default, this tool is configured to limit the memory consumption to 1G.
 You might need to lower this limit if the machine(s) executing the jobs have less memory available.
 If you have a lot of reads to assemble and a machine with enough memory, you can increase it.
-In both cases, you can set the GALAXY_MEMORY_MB environmental variable in the destination section of the job_conf.xml file::
+
+This tool uses the GALAXY_MEMORY_MB environmental variable to limit the its memory usage. If you use a supported cluster type, you just need to limit the memory in the destination section of the job_conf.xml file to the amount of available memory (in MB), for example with a Slurm cluster::
+
+    <destination id="cluster_high_mem" runner="slurm
+        <param id="nativeSpecification">--mem=1024</param>
+    </destination>
+
+If you cluster type does not support memory limit detection, you can also set manually the GALAXY_MEMORY_MB environmental variable in the destination section of the job_conf.xml file to the amount of available memory (in MB)::
 
     <?xml version="1.0"?>
     <!-- A sample job config that explicitly configures job running the way it is configured by default (if there is no explicit config). -->
@@ -22,7 +29,7 @@
         </handlers>
         <destinations>
             <destination id="local" runner="local">
-                <env id="GALAXY_MEMORY_MB">1G</env>
+                <env id="GALAXY_MEMORY_MB">1024</env>
             </destination>
         </destinations>
     </job_conf>