Mercurial > repos > iuc > trinity

comparison run_DE_analysis.xml @ 8:3cc94f4d58ae draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/trinity commit 6dad4ca6483946af64f484feaff78ac9d1d87352
author iuc
date Mon, 20 Jun 2016 11:44:29 -0400
parents a3d60df650b7
children 934ac844f93d
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7:c6bebb3b3962 8:3cc94f4d58ae
3 <requirements> 3 <requirements>
4 <requirement type="package" version="2.1.1">trinity</requirement> 4 <requirement type="package" version="2.1.1">trinity</requirement>
5 <!-- odering is crucial, otherwise R will override the ENV variables from deseq2 --> 5 <!-- odering is crucial, otherwise R will override the ENV variables from deseq2 -->
6 <requirement type="package" version="1.10.0">deseq2</requirement> 6 <requirement type="package" version="1.10.0">deseq2</requirement>
7 <requirement type="package" version="1.10.0">bioconductor-deseq2</requirement> 7 <requirement type="package" version="1.10.0">bioconductor-deseq2</requirement>
8 <requirement type="package" version="3.12.0">edger</requirement> 8 <requirement type="package" version="3.14.0">bioconductor-edger</requirement>
9 <requirement type="package" version="3.12.0">bioconductor-edger</requirement> 9 <requirement type="package" version="3.28.10">bioconductor-limma</requirement>
10 <requirement type="package" version="3.28.2">limma</requirement>
11 <requirement type="package" version="3.27.4">bioconductor-limma</requirement>
12 </requirements> 10 </requirements>
13 <stdio> 11 <stdio>
14 <exit_code range="1:"/> 12 <exit_code range="1:"/>
15 </stdio> 13 </stdio>
16 <command><![CDATA[ 14 <command><![CDATA[