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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit a2cbb117ac27738101c92cc4df8a0e7bcfbff5b8
author iuc
date Mon, 09 Feb 2026 13:53:57 +0000
parents d0adbd40ff55
children
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9014c412d96c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit a5652d3d3d6a07d96d3898659f0254d8265b8215
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1 <tool id="tesseract" name="Tesseract" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="24.2">
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2 <description>Optical Character Recognition</description>
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3 <macros>
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4 <import>macros.xml</import>
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5 </macros>
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6 <expand macro="requirements" />
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7 <expand macro="creators" />
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8 <command detect_errors="exit_code"><![CDATA[
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9 #if str($input_file.ext) == "pdf"
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10 mkdir extracted_images &&
9014c412d96c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit a5652d3d3d6a07d96d3898659f0254d8265b8215
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11 pdfimages -png '$input_file' extracted_images/page &&
9014c412d96c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit a5652d3d3d6a07d96d3898659f0254d8265b8215
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12 ls extracted_images/page*.png > img_paths &&
9014c412d96c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit a5652d3d3d6a07d96d3898659f0254d8265b8215
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13 #else
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14 ln -s '$input_file' img_paths &&
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15 #end if
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16 #if str($models.models_select) == 'own'
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17 mkdir tessdata_dir &&
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18 #set languages = ""
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19 #for $model in $models.tessdata
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
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20 ln -s '${model}' tessdata_dir/${model.element_identifier} &&
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21 #set languages = languages + ("+" if languages else "") + $model.element_identifier.replace(".traineddata", "")
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
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22 #end for
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23 tesseract img_paths output
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
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24 --tessdata-dir tessdata_dir
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25 -l $languages
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26 #else
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27 tesseract img_paths output
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28 --tessdata-dir '${models.tessdata.fields.path}'
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
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29 #if $models.language:
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30 -l ${ str($models.language).replace(",","+") }
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
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31 #end if
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32 #end if
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33 --psm $psm
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34 #if $dpi:
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35 --dpi $dpi
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36 #end if
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37 #if $user_words
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38 --user-words '$user_words'
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39 #end if
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40 #if $user_patterns
9014c412d96c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit a5652d3d3d6a07d96d3898659f0254d8265b8215
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41 --user-patterns '$user_patterns'
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42 #end if
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43 #for $format in $output_formats
9014c412d96c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit a5652d3d3d6a07d96d3898659f0254d8265b8215
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44 -c $format=1
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45 #end for
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46 ]]></command>
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47 <inputs>
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48 <param name="input_file" type="data" format="jpg,png,tif,tiff,bmp,pdf" label="Image file(s)" multiple="false"/>
2
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49 <conditional name="models">
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50 <param name="models_select" type="select" label="Choose between official or own models">
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51 <option value="official">Tesseract official models</option>
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52 <option value="own">Own models</option>
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53 </param>
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54 <when value="official">
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55 <param name="tessdata" type="select" label="Tessdata" help="Language data models">
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56 <options from_data_table="tessdata">
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57 <column name="value" index="0"/>
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58 <column name="name" index="1"/>
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59 <column name="version" index="2"/>
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60 <column name="path" index="3"/>
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61 <filter type="sort_by" column="1"/>
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62 </options>
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63 <validator type="no_options" message="A built-in tesseract model is not available. Please ask the Galaxy admins to install one on the server."/>
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64 </param>
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65 <param name="language" type="select" label="OCR Language(s)" multiple="true" help="In the case of a multilingual image(s), more the one language can be selected" optional="false">
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66 <option value="afr">Afrikaans</option>
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67 <option value="amh">Amharic</option>
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68 <option value="ara">Arabic</option>
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69 <option value="asm">Assamese</option>
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70 <option value="aze">Azerbaijani</option>
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71 <option value="aze_cyrl">Azerbaijani - Cyrilic</option>
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72 <option value="bel">Belarusian</option>
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73 <option value="ben">Bengali</option>
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74 <option value="bod">Tibetan</option>
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75 <option value="bos">Bosnian</option>
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76 <option value="bre">Breton</option>
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77 <option value="bul">Bulgarian</option>
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78 <option value="cat">Catalan; Valencian</option>
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79 <option value="ceb">Cebuano</option>
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80 <option value="ces">Czech</option>
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81 <option value="chi_sim">Chinese simplified</option>
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82 <option value="chi_tra">Chinese traditional</option>
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83 <option value="chr">Cherokee</option>
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84 <option value="cos">Corsican</option>
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85 <option value="cym">Welsh</option>
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
iuc
parents: 1
diff changeset
86 <option value="dan">Danish</option>
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
iuc
parents: 1
diff changeset
87 <option value="deu">German</option>
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
iuc
parents: 1
diff changeset
88 <option value="deu_latf">German Fraktur Latin</option>
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
iuc
parents: 1
diff changeset
89 <option value="div">Dhivehi</option>
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
iuc
parents: 1
diff changeset
90 <option value="dzo">Dzongkha</option>
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
iuc
parents: 1
diff changeset
91 <option value="ell">Greek, Modern, 1453-</option>
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
iuc
parents: 1
diff changeset
92 <option value="eng" selected="true">English</option>
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
iuc
parents: 1
diff changeset
93 <option value="enm">English, Middle, 1100-1500</option>
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
iuc
parents: 1
diff changeset
94 <option value="epo">Esperanto</option>
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
iuc
parents: 1
diff changeset
95 <option value="equ">Math / equation detection module</option>
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
iuc
parents: 1
diff changeset
96 <option value="est">Estonian</option>
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
iuc
parents: 1
diff changeset
97 <option value="eus">Basque</option>
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
iuc
parents: 1
diff changeset
98 <option value="fas">Persian</option>
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
iuc
parents: 1
diff changeset
99 <option value="fao">Faroese</option>
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
iuc
parents: 1
diff changeset
100 <option value="fil">Filipino</option>
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
iuc
parents: 1
diff changeset
101 <option value="fin">Finnish</option>
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
iuc
parents: 1
diff changeset
102 <option value="fra">French</option>
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
iuc
parents: 1
diff changeset
103 <option value="frm">French, Middle, ca.1400-1600</option>
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
iuc
parents: 1
diff changeset
104 <option value="fry">West Frisian</option>
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
iuc
parents: 1
diff changeset
105 <option value="gla">Scottish Gaelic</option>
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
iuc
parents: 1
diff changeset
106 <option value="gle">Irish</option>
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
iuc
parents: 1
diff changeset
107 <option value="glg">Galician</option>
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
iuc
parents: 1
diff changeset
108 <option value="grc">Greek, Ancient, to 1453</option>
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
iuc
parents: 1
diff changeset
109 <option value="guj">Gujarati</option>
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
iuc
parents: 1
diff changeset
110 <option value="hat">Haitian; Haitian Creole</option>
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
iuc
parents: 1
diff changeset
111 <option value="heb">Hebrew</option>
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
iuc
parents: 1
diff changeset
112 <option value="hin">Hindi</option>
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
iuc
parents: 1
diff changeset
113 <option value="hrv">Croatian</option>
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
iuc
parents: 1
diff changeset
114 <option value="hun">Hungarian</option>
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
iuc
parents: 1
diff changeset
115 <option value="hye">Armenian</option>
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
iuc
parents: 1
diff changeset
116 <option value="iku">Inuktitut</option>
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
iuc
parents: 1
diff changeset
117 <option value="ind">Indonesian</option>
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
iuc
parents: 1
diff changeset
118 <option value="isl">Icelandic</option>
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
iuc
parents: 1
diff changeset
119 <option value="ita">Italian</option>
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
iuc
parents: 1
diff changeset
120 <option value="ita_old">Italian - Old</option>
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
iuc
parents: 1
diff changeset
121 <option value="jav">Javanese</option>
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
iuc
parents: 1
diff changeset
122 <option value="jpn">Japanese</option>
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
iuc
parents: 1
diff changeset
123 <option value="kan">Kannada</option>
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
iuc
parents: 1
diff changeset
124 <option value="kat">Georgian</option>
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
iuc
parents: 1
diff changeset
125 <option value="kat_old">Georgian - Old</option>
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
iuc
parents: 1
diff changeset
126 <option value="kaz">Kazakh</option>
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
iuc
parents: 1
diff changeset
127 <option value="khm">Central Khmer</option>
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
iuc
parents: 1
diff changeset
128 <option value="kir">Kirghiz; Kyrgyz</option>
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
iuc
parents: 1
diff changeset
129 <option value="kmr">Kurdish Kurmanji</option>
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
iuc
parents: 1
diff changeset
130 <option value="kor">Korean</option>
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
iuc
parents: 1
diff changeset
131 <option value="kor_vert">Korean vertical</option>
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
iuc
parents: 1
diff changeset
132 <option value="lao">Lao</option>
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
iuc
parents: 1
diff changeset
133 <option value="lat">Latin</option>
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
iuc
parents: 1
diff changeset
134 <option value="lav">Latvian</option>
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
iuc
parents: 1
diff changeset
135 <option value="lit">Lithuanian</option>
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
iuc
parents: 1
diff changeset
136 <option value="ltz">Luxembourgish</option>
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
iuc
parents: 1
diff changeset
137 <option value="mal">Malayalam</option>
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
iuc
parents: 1
diff changeset
138 <option value="mar">Marathi</option>
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
iuc
parents: 1
diff changeset
139 <option value="mkd">Macedonian</option>
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
iuc
parents: 1
diff changeset
140 <option value="mlt">Maltese</option>
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
iuc
parents: 1
diff changeset
141 <option value="mon">Mongolian</option>
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
iuc
parents: 1
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142 <option value="mri">Maori</option>
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
iuc
parents: 1
diff changeset
143 <option value="msa">Malay</option>
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
iuc
parents: 1
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144 <option value="mya">Burmese</option>
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
iuc
parents: 1
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145 <option value="nep">Nepali</option>
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
iuc
parents: 1
diff changeset
146 <option value="nld">Dutch; Flemish</option>
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
iuc
parents: 1
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147 <option value="nor">Norwegian</option>
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
iuc
parents: 1
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148 <option value="oci">Occitan post 1500</option>
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
iuc
parents: 1
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149 <option value="ori">Oriya</option>
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
iuc
parents: 1
diff changeset
150 <option value="osd">Orientation and script detection module</option>
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
iuc
parents: 1
diff changeset
151 <option value="pan">Panjabi; Punjabi</option>
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
iuc
parents: 1
diff changeset
152 <option value="pol">Polish</option>
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
iuc
parents: 1
diff changeset
153 <option value="por">Portuguese</option>
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
iuc
parents: 1
diff changeset
154 <option value="pus">Pushto; Pashto</option>
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
iuc
parents: 1
diff changeset
155 <option value="que">Quechua</option>
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
iuc
parents: 1
diff changeset
156 <option value="ron">Romanian; Moldavian; Moldovan</option>
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
iuc
parents: 1
diff changeset
157 <option value="rus">Russian</option>
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
iuc
parents: 1
diff changeset
158 <option value="san">Sanskrit</option>
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
iuc
parents: 1
diff changeset
159 <option value="sin">Sinhala; Sinhalese</option>
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
iuc
parents: 1
diff changeset
160 <option value="slk">Slovak</option>
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
iuc
parents: 1
diff changeset
161 <option value="slv">Slovenian</option>
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
iuc
parents: 1
diff changeset
162 <option value="snd">Sindhi</option>
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
iuc
parents: 1
diff changeset
163 <option value="spa">Spanish; Castilian</option>
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
iuc
parents: 1
diff changeset
164 <option value="spa_old">Spanish; Castilian - Old</option>
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
iuc
parents: 1
diff changeset
165 <option value="sqi">Albanian</option>
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
iuc
parents: 1
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166 <option value="srp">Serbian</option>
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
iuc
parents: 1
diff changeset
167 <option value="srp_latn">Serbian - Latin</option>
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
iuc
parents: 1
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168 <option value="sun">Sundanese</option>
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
iuc
parents: 1
diff changeset
169 <option value="swa">Swahili</option>
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
iuc
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170 <option value="swe">Swedish</option>
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171 <option value="syr">Syriac</option>
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172 <option value="tam">Tamil</option>
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173 <option value="tat">Tatar</option>
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174 <option value="tel">Telugu</option>
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175 <option value="tgk">Tajik</option>
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176 <option value="tha">Thai</option>
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177 <option value="tir">Tigrinya</option>
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178 <option value="ton">Tonga</option>
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179 <option value="tur">Turkish</option>
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180 <option value="uig">Uighur; Uyghur</option>
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181 <option value="ukr">Ukrainian</option>
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182 <option value="urd">Urdu</option>
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183 <option value="uzb">Uzbek</option>
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184 <option value="uzb_cyrl">Uzbek - Cyrilic</option>
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185 <option value="vie">Vietnamese</option>
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186 <option value="yid">Yiddish</option>
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187 <option value="yor">Yoruba</option>
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188 </param>
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189 </when>
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190 <when value="own">
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191 <param name="tessdata" type="data" format="binary" label="Tessdata" help="Language data models" multiple="true"/>
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192 </when>
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193 </conditional>
0
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194 <param name="user_words" type="data" format="txt" label="User words file" optional="true" help="The user words file allows you to specify a list of words that Tesseract should treat as known words. One word per line"/>
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195 <param name="user_patterns" type="data" format="txt" label="User patterns file" optional="true" help="One pattern per line in UTF-8 format. For more information please visit the tesseract docs about patterns linked in the help section"/>
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196 <param name="output_formats" type="select" label="Output format(s)" multiple="true" optional="false">
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197 <option value="tessedit_create_txt" selected="true">Text</option>
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198 <option value="tessedit_create_pdf">PDF</option>
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199 <option value="tessedit_create_hocr">HOCR</option>
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200 <option value="tessedit_create_tsv">TSV</option>
3
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201 <option value="tessedit_create_alto">ALTO</option>
4
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202 <option value="tessedit_create_page_xml">PAGE</option>
0
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203 </param>
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204 <param argument="--psm" type="select" label="Page Segmentation Mode (PSM)" help="How the page layout is interpreted." optional="true">
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205 <option value="0">Orientation and script detection only</option>
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206 <option value="1">Automatic page segmentation with OSD</option>
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207 <option value="2">Automatic page segmentation, but no OSD, or OCR</option>
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208 <option value="3" selected="true">Fully automatic page segmentation, but no OSD</option>
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209 <option value="4">Assume a single column of text of variable sizes</option>
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210 <option value="5">Assume a single uniform block of vertically aligned text</option>
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211 <option value="6">Assume a single uniform block of text</option>
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212 <option value="7">Treat the image as a single text line</option>
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213 <option value="8">Treat the image as a single word</option>
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214 <option value="9">Treat the image as a single word in a circle</option>
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215 <option value="10">Treat the image as a single character</option>
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216 <option value="11">Sparse text. Find as much text as possible in no particular order</option>
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217 <option value="12">Sparse text with OSD</option>
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218 <option value="13">Raw line. Treat the image as a single text line, bypassing hacks that are Tesseract-specific</option>
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219 </param>
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220 <param argument="--dpi" type="integer" label="Image DPI (dots per inch)" min="100" help="When left empty, the resolution in retrieved from the image metadata. If this information in not icluded, Tesseract will make a guess. Tesseract performes best on images with at least 300 dpi" optional="true" />
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221 </inputs>
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222 <outputs>
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223 <data name="output_text" format="txt" from_work_dir="output.txt" label="${tool.name} on ${on_string}: Text">
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224 <filter>'tessedit_create_txt' in output_formats</filter>
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225 </data>
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226 <data name="output_pdf" format="pdf" from_work_dir="output.pdf" label="${tool.name} on ${on_string}: PDF">
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227 <filter>'tessedit_create_pdf' in output_formats</filter>
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228 </data>
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229 <data name="output_hocr" format="html" from_work_dir="output.hocr" label="${tool.name} on ${on_string}: HOCR">
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230 <filter>'tessedit_create_hocr' in output_formats</filter>
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231 </data>
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232 <data name="output_tsv" format="tsv" from_work_dir="output.tsv" label="${tool.name} on ${on_string}: TSV">
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233 <filter>'tessedit_create_tsv' in output_formats</filter>
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234 </data>
3
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235 <data name="output_alto" format="xml" from_work_dir="output.xml" label="${tool.name} on ${on_string}: ALTO">
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236 <filter>'tessedit_create_alto' in output_formats</filter>
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237 </data>
5
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238 <data name="output_page" format="xml" from_work_dir="output.page.xml" label="${tool.name} on ${on_string}: PAGE">
4
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239 <filter>'tessedit_create_page_xml' in output_formats</filter>
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240 </data>
0
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241 </outputs>
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242 <tests>
4
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243 <test expect_num_outputs="4">
2
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244 <conditional name="models">
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245 <param name="models_select" value="official"/>
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246 <param name="tessdata" value="test_tessdata"/>
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247 <param name="language" value="chr"/>
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248 </conditional>
0
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249 <param name="input_file" value="eurotext.png"/>
2
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250 <param name="user_patterns" value="eng.user-patterns"/>
0
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251 <param name="user_words" value="eng.user-words"/>
4
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252 <param name="output_formats" value="tessedit_create_txt,tessedit_create_pdf,tessedit_create_alto,tessedit_create_page_xml"/>
0
9014c412d96c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit a5652d3d3d6a07d96d3898659f0254d8265b8215
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253 <param name="psm" value="3"/>
9014c412d96c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit a5652d3d3d6a07d96d3898659f0254d8265b8215
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254 <output name="output_text" file="image_output.txt"/>
9014c412d96c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit a5652d3d3d6a07d96d3898659f0254d8265b8215
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255 <output name="output_pdf" file="image_output.pdf"/>
3
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256 <output name="output_alto">
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257 <assert_contents>
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258 <is_valid_xml/>
5
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259 <xml_element path="./{http://www.loc.gov/standards/alto/ns-v3#}Layout"/>
3
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260 </assert_contents>
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261 </output>
4
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262 <output name="output_page">
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263 <assert_contents>
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264 <is_valid_xml/>
5
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265 <xml_element path="./{http://schema.primaresearch.org/PAGE/gts/pagecontent/2019-07-15}Page"/>
4
25d5d9057956 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit 5aa82b893895d90bfe44502f1494d23c7fbc70f9
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266 </assert_contents>
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267 </output>
0
9014c412d96c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit a5652d3d3d6a07d96d3898659f0254d8265b8215
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268 </test>
9014c412d96c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit a5652d3d3d6a07d96d3898659f0254d8265b8215
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269 <test expect_num_outputs="2">
2
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270 <conditional name="models">
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271 <param name="models_select" value="official"/>
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272 <param name="tessdata" value="test_tessdata"/>
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273 <param name="language" value="chr"/>
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
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274 </conditional>
0
9014c412d96c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit a5652d3d3d6a07d96d3898659f0254d8265b8215
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275 <param name="input_file" value="test_image_cherokee.png"/>
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276 <param name="output_formats" value="tessedit_create_hocr,tessedit_create_tsv"/>
9014c412d96c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit a5652d3d3d6a07d96d3898659f0254d8265b8215
iuc
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277 <param name="psm" value="11"/>
9014c412d96c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit a5652d3d3d6a07d96d3898659f0254d8265b8215
iuc
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278 <output name="output_hocr">
9014c412d96c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit a5652d3d3d6a07d96d3898659f0254d8265b8215
iuc
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279 <assert_contents>
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280 <has_text text="Ꮳ"/>
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iuc
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281 <has_text text="ᏌᎠᏯᏙᏣᎠ"/>
6
814375a55d60 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit a2cbb117ac27738101c92cc4df8a0e7bcfbff5b8
iuc
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282 <has_size value="1805" delta="100"/>
0
9014c412d96c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit a5652d3d3d6a07d96d3898659f0254d8265b8215
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283 </assert_contents>
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284 </output>
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285 <output name="output_tsv" file="image_output.tsv"/>
9014c412d96c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit a5652d3d3d6a07d96d3898659f0254d8265b8215
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286 </test>
6
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iuc
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287 <test expect_num_outputs="1">
814375a55d60 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit a2cbb117ac27738101c92cc4df8a0e7bcfbff5b8
iuc
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288 <conditional name="models">
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289 <param name="models_select" value="official"/>
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290 <param name="tessdata" value="test_tessdata"/>
814375a55d60 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit a2cbb117ac27738101c92cc4df8a0e7bcfbff5b8
iuc
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291 <param name="language" value="chr"/>
814375a55d60 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit a2cbb117ac27738101c92cc4df8a0e7bcfbff5b8
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292 </conditional>
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293 <param name="input_file" value="test_multipage.tif"/>
814375a55d60 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit a2cbb117ac27738101c92cc4df8a0e7bcfbff5b8
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294 <param name="output_formats" value="tessedit_create_txt"/>
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295 <output name="output_text">
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iuc
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296 <assert_contents>
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iuc
parents: 5
diff changeset
297 <has_text text="2"/>
814375a55d60 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit a2cbb117ac27738101c92cc4df8a0e7bcfbff5b8
iuc
parents: 5
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298 <has_text text="ᎢᏚᎢᏤᎬ"/>
814375a55d60 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit a2cbb117ac27738101c92cc4df8a0e7bcfbff5b8
iuc
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299 <has_size value="83"/>
814375a55d60 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit a2cbb117ac27738101c92cc4df8a0e7bcfbff5b8
iuc
parents: 5
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300 <has_n_lines n="5"/>
814375a55d60 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit a2cbb117ac27738101c92cc4df8a0e7bcfbff5b8
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301 </assert_contents>
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302 </output>
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iuc
parents: 5
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303 </test>
0
9014c412d96c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit a5652d3d3d6a07d96d3898659f0254d8265b8215
iuc
parents:
diff changeset
304 <test expect_num_outputs="4">
2
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
iuc
parents: 1
diff changeset
305 <conditional name="models">
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
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306 <param name="models_select" value="official"/>
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
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307 <param name="tessdata" value="test_tessdata"/>
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
iuc
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308 <param name="language" value="chr"/>
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
iuc
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309 </conditional>
0
9014c412d96c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit a5652d3d3d6a07d96d3898659f0254d8265b8215
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310 <param name="input_file" value="test_input.pdf"/>
9014c412d96c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit a5652d3d3d6a07d96d3898659f0254d8265b8215
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311 <param name="output_formats" value="tessedit_create_txt,tessedit_create_pdf,tessedit_create_hocr,tessedit_create_tsv"/>
9014c412d96c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit a5652d3d3d6a07d96d3898659f0254d8265b8215
iuc
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diff changeset
312 <param name="psm" value="11"/>
9014c412d96c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit a5652d3d3d6a07d96d3898659f0254d8265b8215
iuc
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313 <output name="output_hocr">
9014c412d96c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit a5652d3d3d6a07d96d3898659f0254d8265b8215
iuc
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314 <assert_contents>
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iuc
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315 <has_text text="Ꮳ"/>
9014c412d96c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit a5652d3d3d6a07d96d3898659f0254d8265b8215
iuc
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316 <has_text text="ᏌᎠᏯᏙᏣᎠ"/>
9014c412d96c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit a5652d3d3d6a07d96d3898659f0254d8265b8215
iuc
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317 <has_size value="13185" delta="10"/>
9014c412d96c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit a5652d3d3d6a07d96d3898659f0254d8265b8215
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318 </assert_contents>
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319 </output>
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iuc
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320 <output name="output_tsv" file="pdf_output.tsv"/>
9014c412d96c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit a5652d3d3d6a07d96d3898659f0254d8265b8215
iuc
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321 <output name="output_text" file="pdf_output.txt"/>
9014c412d96c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit a5652d3d3d6a07d96d3898659f0254d8265b8215
iuc
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322 <output name="output_pdf" file="pdf_output.pdf"/>
2
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
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323 </test>
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
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324 <test expect_num_outputs="4">
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
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325 <param name="input_file" value="test_input.pdf"/>
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
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326 <param name="output_formats" value="tessedit_create_txt,tessedit_create_pdf,tessedit_create_hocr,tessedit_create_tsv"/>
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
iuc
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327 <param name="psm" value="11"/>
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
iuc
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328 <conditional name="models">
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
iuc
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329 <param name="models_select" value="own"/>
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
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330 <param name="tessdata" value="tessdata/chr.traineddata"/>
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331 </conditional>
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
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332 <output name="output_hocr">
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333 <assert_contents>
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iuc
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334 <has_text text="Ꮳ"/>
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iuc
parents: 1
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335 <has_text text="ᏌᎠᏯᏙᏣᎠ"/>
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
iuc
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336 <has_size value="13185" delta="10"/>
eea3720b512f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tesseract commit da3b71e3076fb7475d1bb9c96293a0c83da8a62e
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337 </assert_contents>
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338 </output>
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339 <output name="output_tsv" file="pdf_output.tsv"/>
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340 <output name="output_text" file="pdf_output.txt"/>
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341 <output name="output_pdf" file="pdf_output.pdf"/>
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342 </test>
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343 </tests>
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344 <help><![CDATA[
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345 Tesseract OCR Tool
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346 ------------------
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347 Tesseract is an OCR engine with support for unicode and the ability to recognize more than 100 languages out of the box.
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348
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349 * `Tesseract User Manual <https://tesseract-ocr.github.io/tessdoc/>`_
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350
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351 * `API example for user patterns <https://tesseract-ocr.github.io/tessdoc/APIExample-user_patterns.html>`_
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352
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353 **Tesseract license**
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354
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355 * `Apache-2.0 <https://raw.githubusercontent.com/tesseract-ocr/tesseract/refs/heads/main/LICENSE>`_
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356
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357 **Poppler license**
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358
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359 * `GPL-2.0-only <https://gitlab.freedesktop.org/poppler/poppler/-/raw/master/COPYING>`_
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360 ]]></help>
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361 <expand macro="citations" />
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362 </tool>