Mercurial > repos > iuc > tb_profiler_collate
comparison replace_id_field_with_element_id.py @ 0:5b218b5eedb6 draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/tb-profiler commit 7dba70c70c9fe33353a0fd21803b11cfddc42c32
| author | iuc |
|---|---|
| date | Tue, 21 Oct 2025 10:24:27 +0000 |
| parents | |
| children |
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| -1:000000000000 | 0:5b218b5eedb6 |
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| 1 import json | |
| 2 import os | |
| 3 import re | |
| 4 import sys | |
| 5 | |
| 6 | |
| 7 input_file = sys.argv[1] | |
| 8 output_file = sys.argv[2] | |
| 9 | |
| 10 safe_file_name = re.sub(r'[^\w\-_\.]', '_', os.path.basename(output_file)) | |
| 11 | |
| 12 if not safe_file_name.endswith(".results.json"): | |
| 13 safe_file_name += ".results.json" | |
| 14 | |
| 15 file_id = os.path.splitext(safe_file_name)[0] | |
| 16 | |
| 17 with open(input_file, "r") as f: | |
| 18 data = json.load(f) | |
| 19 | |
| 20 if data.get("id") == "tbprofiler": | |
| 21 data["id"] = file_id | |
| 22 | |
| 23 with open(safe_file_name, "w") as f: | |
| 24 json.dump(data, f, indent=4) | |
| 25 | |
| 26 print(f"Copied {input_file} -> {safe_file_name}, updated id = {file_id}") |